RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	ETS2	P15036	469 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	CD40	P25942	277 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	IDH3A	P50213	366 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	KRTAP1-1	Q07627	177 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	OTUD3	Q5T2D3	398 aa	Predicted RBP	11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	TSPO2	Q5TGU0	170 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	C11orf71	Q6IPW1	123 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	C6orf89	Q6UWU4	347 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	TMEM108	Q6UXF1	575 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	MSRB3	Q8IXL7	192 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	UBE2J2	Q8N2K1	259 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	OR9K2	Q8NGE7	335 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	OR52E4	Q8NGH9	312 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	STK35	Q8TDR2	534 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	STON2	Q8WXE9	905 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	GTPBP3	Q969Y2	492 aa	Known RBP	11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	C3orf49	Q96BT1	292 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	DNAJA3	Q96EY1	480 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	RAD21L1	Q9H4I0	556 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ARMC7	Q9H6L4	198 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	C12orf10	Q9HB07	376 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	TCF7L2	Q9NQB0	619 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	FAIM	Q9NVQ4	179 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	SLC25A37	Q9NYZ2	338 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ARFGEF3	Q5TH69	2177 aa		11.51	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ALPK2	Q86TB3	2170 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	CIB4	A0PJX0	185 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475		E7EQL1	145 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	AKR7A3	O95154	331 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	IGHV4-39	P01824	125 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	NUDT7	P0C024	238 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	MPG	P29372	298 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	TTK	P33981	857 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	COPZ1	P61923	177 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	EGR4	Q05215	589 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	CLEC12B	Q2HXU8	276 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	C6orf10	Q5SRN2	563 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	SLC2A7	Q6PXP3	512 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	KLHL17	Q6TDP4	642 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	CREB3L2	Q70SY1	520 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	SERPINA11	Q86U17	422 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	LSMEM1	Q8N8F7	131 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	POMGNT2	Q8NAT1	580 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	OR52N5	Q8NH56	324 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	BBS10	Q8TAM1	723 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ZNF385A	Q96PM9	386 aa	Known RBP	11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	SLCO5A1	Q9H2Y9	848 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	SLCO1B3	Q9NPD5	702 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	SLC17A5	Q9NRA2	495 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	AMDHD2	Q9Y303	409 aa		11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	CHD3	Q12873	2000 aa	Known RBP	11.5	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ABCA1	O95477	2261 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	TMEM247	A6NEH6	219 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	CCT8L1P	A6NM43	557 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	SMAD7	O15105	426 aa	Known RBP	11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	FRS3	O43559	492 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ARAF	P10398	606 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	PAX7	P23759	505 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	PRKAR1B	P31321	381 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	CDKN1A	P38936	164 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ATP4B	P51164	291 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	CDH11	P55287	796 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	TGFBR3	Q03167	851 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	BNIP2	Q12982	314 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	OR7A5	Q15622	319 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ZNF311	Q5JNZ3	666 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	C1orf140	Q5VVS0	124 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	AGAP6	Q5VW22	663 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	CASP12	Q6UXS9	341 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	LSR	Q86X29	649 aa	Predicted RBP	11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	EPHX4	Q8IUS5	362 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	C10orf111	Q8N326	155 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	GOLGA6L1	Q8N7Z2	621 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	MFSD8	Q8NHS3	518 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	MAL2	Q969L2	176 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ATP6V1G3	Q96LB4	118 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	DHRS9	Q9BPW9	319 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	EBF4	Q9BQW3	602 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	PTDSS2	Q9BVG9	487 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	SLAMF8	Q9P0V8	285 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	UPB1	Q9UBR1	384 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	RASD1	Q9Y272	281 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	B3GALT5	Q9Y2C3	310 aa		11.49	□□□□□ -0.57
SEMA4D-223	ENST00000540475	SVEP1	Q4LDE5	3571 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	JMJD1C	Q15652	2540 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	LOC102725191	A0A1B0GVB3	256 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	OR6C65	A6NJZ3	312 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	POLR3G	O15318	223 aa	Predicted RBP	11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	GPX2	P18283	190 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	PPIB	P23284	216 aa	Known RBP	11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ZNF83	P51522	516 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	SLC25A3	Q00325	362 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	NRF1	Q16656	503 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	PAGE3	Q5JUK9	113 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	TMEM225	Q6GV28	225 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	ZNF544	Q6NX49	715 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	DHRS4L2	Q6PKH6	230 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	AAED1	Q7RTV5	226 aa		11.48	□□□□□ -0.57
SEMA4D-223	ENST00000540475	CADM2	Q8N3J6	435 aa		11.48	□□□□□ -0.57

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