RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 MSNP26038 577 aaKnown RBP3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 GIFP27352 417 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 PRDX3P30048 256 aaKnown RBP3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 PCK1P35558 622 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 HPCAL1P37235 193 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 P2RY1P47900 373 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 RFX3P48380 749 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 HSPA13P48723 471 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 PCYT1AP49585 367 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 STK19P49842 368 aaPredicted RBP3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 SGSHP51688 502 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 PDX1P52945 283 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 UCNP55089 124 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 CDKL1Q00532 357 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 LGALS3BPQ08380 585 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 ITGA9Q13797 1035 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 TFDP1Q14186 410 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 GRB7Q14451 532 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 CYTH1Q15438 398 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 UAP1Q16222 522 aaPredicted RBP3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 VPS26BQ4G0F5 336 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 PIK3CD-AS1Q5SR53 167 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 OTUD1Q5VV17 481 aaPredicted RBP3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 STUMQ69YW2 141 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 SLC27A4Q6P1M0 643 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 ZNF562Q6V9R5 426 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 TMEM64Q6YI46 380 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 ZNF788Q6ZQV5 615 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 LRRC74BQ6ZQY2 392 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 ASRGL1Q7L266 308 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 HDDC2Q7Z4H3 204 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 NET1Q7Z628 596 aaPredicted RBP3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 ERI1Q8IV48 349 aaKnown RBP3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 CLEC4FQ8N1N0 589 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 CCDC185Q8N715 623 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 LRRC75AQ8NAA5 344 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 TTLQ8NG68 377 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 OR11H4Q8NGC9 324 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 OR4A4PQ8NGN8 299 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 NUBPLQ8TB37 319 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 LRRC15Q8TF66 581 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 NR4A3Q92570 626 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 CCDC127Q96BQ5 260 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 SARAFQ96BY9 339 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 PPP1R14BQ96C90 147 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 OPTNQ96CV9 577 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 BPIFA2Q96DR5 249 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 SERAC1Q96JX3 654 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 UHRF2Q96PU4 802 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 CSPG4P5Q96PW8 444 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 MBOAT4Q96T53 435 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 C7orf50Q9BRJ6 194 aaKnown RBP3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 DCTN5Q9BTE1 182 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 MCRIP2Q9BUT9 160 aaKnown RBP3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 FAM49AQ9H0Q0 323 aaPredicted RBP3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 OR51V1Q9H2C8 321 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 KLK15Q9H2R5 256 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 UGT1A10Q9HAW8 530 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 FZD3Q9NPG1 666 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 FLRT3Q9NZU0 649 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 ZNF319Q9P2F9 582 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 MYEF2Q9P2K5 600 aaKnown RBP3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 MUTYHQ9UIF7 546 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 DAPK2Q9UIK4 370 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 IKZF3Q9UKT9 509 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 DOCK3Q8IZD9 2030 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 BSNQ9UPA5 3926 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 CD163L1Q9NR16 1453 aa3.35□□□□□ -1.87
AC055720.1-201ENST00000539552 A0A1B0GW15 77 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 TMEM213A2RRL7 107 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 CCDC182A6NF36 153 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 FABP12A6NFH5 140 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 MKRN2OSH3BPM6 223 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 KLRC4-KLRK1H3BQV0 150 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 TMEM178BH3BS89 294 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 RFXANKO14593 260 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 CCSO14618 274 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 SH2D1BO14796 132 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 TOX3O15405 576 aaPredicted RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 EMC8O43402 210 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 SRPX2O60687 465 aaPredicted RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 RAMP3O60896 148 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 SH3BGRLO75368 114 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 RFPL2O75678 378 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 WISP2O76076 250 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 BRI3O95415 125 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 BAG4O95429 457 aaKnown RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 NSA2O95478 260 aaKnown RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 SYF2O95926 243 aaKnown RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 NR3C1P04150 777 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 H2BFMP0C1H6 154 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 TRIM49P0CI25 452 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 TRIM49CP0CI26 452 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 ANXA3P12429 323 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 GP1BBP13224 206 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 ZNF26P17031 533 aaPredicted RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 AOC1P19801 751 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 KITLGP21583 273 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 BGNP21810 368 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms