RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 SLC13A4Q9UKG4 626 aa13.84□□□□□ -0.19
CIT-210ENST00000539413 SLC9A8Q9Y2E8 581 aa13.84□□□□□ -0.19
CIT-210ENST00000539413 MPDZO75970 2070 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 BBIP1A8MTZ0 92 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 FTCDNL1E5RQL4 147 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 M0R3H8 397 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 PLAUP00749 431 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 PCGF2P35227 344 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 RPS5P46782 204 aaKnown RBP13.83□□□□□ -0.2
CIT-210ENST00000539413 P2RY4P51582 365 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 NCALDP61601 193 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 STK11Q15831 433 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 VMACQ2NL98 169 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 DEFB113Q30KQ7 82 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 ALG10BQ5I7T1 473 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 GPAT4Q86UL3 456 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 ZIC4Q8N9L1 334 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 GPR32P1Q8NGA4 272 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 OR9K2Q8NGE7 335 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 HSD17B8Q92506 261 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 SLC25A36Q96CQ1 311 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 KTI12Q96EK9 354 aaPredicted RBP13.83□□□□□ -0.2
CIT-210ENST00000539413 ZNF385AQ96PM9 386 aaKnown RBP13.83□□□□□ -0.2
CIT-210ENST00000539413 ARHGDIGQ99819 225 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 SF3B5Q9BWJ5 86 aaKnown RBP13.83□□□□□ -0.2
CIT-210ENST00000539413 ARMCX1Q9P291 453 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 CAPN7Q9Y6W3 813 aa13.83□□□□□ -0.2
CIT-210ENST00000539413 IGKV1D-42A0A075B6H8 117 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 LGI1O95970 557 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 NR1H2P55055 460 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 FOXG1P55316 489 aaPredicted RBP13.82□□□□□ -0.2
CIT-210ENST00000539413 FAPQ12884 760 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 OR1Q1Q15612 314 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 ACKR1Q16570 336 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 TMEM225Q6GV28 225 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 ULK3Q6PHR2 472 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 SEZ6L2Q6UXD5 910 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 ZNF704Q6ZNC4 412 aaPredicted RBP13.82□□□□□ -0.2
CIT-210ENST00000539413 PATL1Q86TB9 770 aaKnown RBP13.82□□□□□ -0.2
CIT-210ENST00000539413 CALHM3Q86XJ0 350 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 P3H2Q8IVL5 708 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 SLC30A8Q8IWU4 369 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 ZNF433Q8N7K0 673 aaPredicted RBP13.82□□□□□ -0.2
CIT-210ENST00000539413 OR8J3Q8NGG0 315 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 MFSD8Q8NHS3 518 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 RNF217Q8TC41 542 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 DNAJA4Q8WW22 397 aaPredicted RBP13.82□□□□□ -0.2
CIT-210ENST00000539413 SLC38A4Q969I6 547 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 TAMM41Q96BW9 452 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 ALPK1Q96QP1 1244 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 SH3GL1Q99961 368 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 USB1Q9BQ65 265 aaKnown RBP13.82□□□□□ -0.2
CIT-210ENST00000539413 SLC7A10Q9NS82 523 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 ASB6Q9NWX5 421 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 SEC14L4Q9UDX3 406 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 MALT1Q9UDY8 824 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 USP22Q9UPT9 525 aa13.82□□□□□ -0.2
CIT-210ENST00000539413 A0A0B4J2E0 115 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 A0A1B0GX12 115 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 RAD51DO75771 328 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 NPPAP01160 153 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 PNMTP11086 282 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 GGT1P19440 569 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 CD247P20963 164 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 CRYBA2P53672 197 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 NPTX1Q15818 432 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 INTS11Q5TA45 600 aaKnown RBP13.81□□□□□ -0.2
CIT-210ENST00000539413 TSPO2Q5TGU0 170 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 FAM91A1Q658Y4 838 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 AAED1Q7RTV5 226 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 RANBP3LQ86VV4 465 aaPredicted RBP13.81□□□□□ -0.2
CIT-210ENST00000539413 KDM8Q8N371 416 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 POU5F2Q8N7G0 328 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 PCYOX1LQ8NBM8 494 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 OR4D11Q8NGI4 311 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 TAAR8Q969N4 342 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 TMEM45BQ96B21 275 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 SLC47A1Q96FL8 570 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 MCHR1Q99705 422 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 ECSITQ9BQ95 431 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 TMEM204Q9BSN7 226 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 EVA1AQ9H8M9 152 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 TMEM27Q9HBJ8 222 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 PARPBPQ9NWS1 579 aa13.81□□□□□ -0.2
CIT-210ENST00000539413 A0A087WUJ7 227 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 CIB4A0PJX0 185 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 OR5H1A6NKK0 313 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 CCT8L1PA6NM43 557 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 PDLIM1O00151 329 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 SLC22A2O15244 555 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 C8BP07358 591 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 ITGA5P08648 1049 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 PTNP21246 168 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 GTF2E2P29084 291 aaKnown RBP13.8□□□□□ -0.2
CIT-210ENST00000539413 CDH12P55289 794 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 PPA1Q15181 289 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 NRF1Q16656 503 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 TIMM23BQ5SRD1 257 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 NCMAPQ5T1S8 102 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 C9orf135Q5VTT2 229 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms