RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 TMEM99Q8N816 258 aa17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 POMGNT2Q8NAT1 580 aa17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 GLB1L3Q8NCI6 653 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 OR9K2Q8NGE7 335 aa17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 FAM168AQ92567 244 aa17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 REPIN1Q9BWE0 567 aaKnown RBP17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 PIF1Q9H611 641 aa17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 WDR55Q9H6Y2 383 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 RLIMQ9NVW2 624 aa17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 PMF1-BGLAPU3KQ54 211 aa17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 MALRD1Q5VYJ5 2156 aa17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 CDHR4A6H8M9 788 aa17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 AQP7P3A6NL99 342 aa17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 TRPC5OSA6NMA1 111 aa17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 GKN3PP0CG01 181 aa17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 EPHA3P29320 983 aa17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 COPZ1P61923 177 aa17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 LIN52Q52LA3 116 aa17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 C6orf52Q5T4I8 152 aa17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 HHATQ5VTY9 493 aa17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 ABHD12BQ7Z5M8 362 aaPredicted RBP17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 VRK2Q86Y07 508 aa17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 ZIC4Q8N9L1 334 aa17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 OR52P1PQ8NH57 321 aa17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 ZNF385AQ96PM9 386 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 TAPBPLQ9BX59 468 aa17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 CALML5Q9NZT1 146 aa17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 P2RX2Q9UBL9 471 aa17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 ARFGEF3Q5TH69 2177 aa17.22■□□□□ 0.35
TNFRSF1B-204ENST00000536782 RNF212BA8MTL3 300 aa17.21■□□□□ 0.35
TNFRSF1B-204ENST00000536782 HDAC3O15379 428 aa17.21■□□□□ 0.35
TNFRSF1B-204ENST00000536782 IL6P05231 212 aa17.21■□□□□ 0.35
TNFRSF1B-204ENST00000536782 CDH2P19022 906 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1B-204ENST00000536782 ACAA2P42765 397 aaKnown RBP17.21■□□□□ 0.35
TNFRSF1B-204ENST00000536782 EFNA4P52798 201 aa17.21■□□□□ 0.35
TNFRSF1B-204ENST00000536782 VLDLRP98155 873 aa17.21■□□□□ 0.35
TNFRSF1B-204ENST00000536782 MAPK11Q15759 364 aa17.21■□□□□ 0.35
TNFRSF1B-204ENST00000536782 TMEM225Q6GV28 225 aa17.21■□□□□ 0.35
TNFRSF1B-204ENST00000536782 WBP2NLQ6ICG8 309 aa17.21■□□□□ 0.35
TNFRSF1B-204ENST00000536782 ZNF836Q6ZNA1 936 aa17.21■□□□□ 0.35
TNFRSF1B-204ENST00000536782 GPAT4Q86UL3 456 aa17.21■□□□□ 0.35
TNFRSF1B-204ENST00000536782 CADM2Q8N3J6 435 aa17.21■□□□□ 0.35
TNFRSF1B-204ENST00000536782 DSPPQ9NZW4 1301 aa17.21■□□□□ 0.34
TNFRSF1B-204ENST00000536782 A8MVM7 634 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 ATP6V1G2-DDX39BF2Z307 99 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 KRT33AO76009 404 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 CSF3P09919 207 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 IDO1P14902 403 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 CRATP43155 626 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 MVDP53602 400 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 CRISP3P54108 245 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 BNIP2Q12982 314 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 HIKESHIQ53FT3 197 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 ANKRD42Q8N9B4 389 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 C10orf105Q8TEF2 133 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 PROX1Q92786 737 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 ZBTB9Q96C00 473 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 AURKBQ96GD4 344 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 BOD1Q96IK1 185 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 MANSC1Q9H8J5 431 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 SLC6A13Q9NSD5 602 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 THAP1Q9NVV9 213 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 TMEM45AQ9NWC5 275 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 ADPRHL2Q9NX46 363 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 MOKQ9UQ07 419 aa17.2■□□□□ 0.34
TNFRSF1B-204ENST00000536782 KLF11O14901 512 aa17.19■□□□□ 0.34
TNFRSF1B-204ENST00000536782 SLC22A3O75751 556 aa17.19■□□□□ 0.34
TNFRSF1B-204ENST00000536782 VAMP5O95183 116 aa17.19■□□□□ 0.34
TNFRSF1B-204ENST00000536782 ANP32DO95626 131 aa17.19■□□□□ 0.34
TNFRSF1B-204ENST00000536782 BCHEP06276 602 aa17.19■□□□□ 0.34
TNFRSF1B-204ENST00000536782 KITP10721 976 aa17.19■□□□□ 0.34
TNFRSF1B-204ENST00000536782 ETFAP13804 333 aa17.19■□□□□ 0.34
TNFRSF1B-204ENST00000536782 NCF2P19878 526 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF1B-204ENST00000536782 LARS2Q15031 903 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1B-204ENST00000536782 ZSWIM7Q19AV6 140 aa17.19■□□□□ 0.34
TNFRSF1B-204ENST00000536782 PDCD4Q53EL6 469 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1B-204ENST00000536782 RNF220Q5VTB9 566 aa17.19■□□□□ 0.34
TNFRSF1B-204ENST00000536782 NXNQ6DKJ4 435 aa17.19■□□□□ 0.34
TNFRSF1B-204ENST00000536782 SLC38A5Q8WUX1 472 aa17.19■□□□□ 0.34
TNFRSF1B-204ENST00000536782 OBP2BQ9NPH6 170 aa17.19■□□□□ 0.34
TNFRSF1B-204ENST00000536782 CDC42EP3Q9UKI2 254 aa17.19■□□□□ 0.34
TNFRSF1B-204ENST00000536782 ZNF443Q9Y2A4 671 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF1B-204ENST00000536782 A0A096LPI6 279 aa17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 SLCO1B7G3V0H7 640 aa17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 FRS3O43559 492 aa17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 SNNO75324 88 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 F12P00748 615 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 TFPTP0C1Z6 253 aa17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 ZCCHC18P0CG32 403 aa17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 FAM157CP0CG43 387 aa17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 DSTNP60981 165 aa17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 C1orf140Q5VVS0 124 aa17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 NANOS1Q8WY41 292 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 FBXO17Q96EF6 278 aa17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 KCNK17Q96T54 332 aa17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 ARMC7Q9H6L4 198 aa17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 RMND5AQ9H871 391 aa17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 TPT1P8Q9HAU6 139 aa17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 CACYBPQ9HB71 228 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms