RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 PPM1BO75688 479 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 MT-ND5P03915 603 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 PRKAR1AP10644 381 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 ZNF19P17023 458 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 F8A1P23610 371 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 MST1P26927 711 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 HLA-DMAP28067 261 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 RPL4P36578 427 aaKnown RBP12.22□□□□□ -0.45
VPS33B-202ENST00000535906 ZP2Q05996 745 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 C1orf189Q5VU69 101 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 WBP2NLQ6ICG8 309 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 PLET1Q6UQ28 207 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 RPTNQ6XPR3 784 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 UTS2BQ765I0 119 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 NR2C2APQ86WQ0 139 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 GPALPP1Q8IXQ4 340 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 CARFQ8N187 725 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 GHDCQ8N2G8 530 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 ZNRF4Q8WWF5 429 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 SLC41A2Q96JW4 573 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 DMRTB1Q96MA1 342 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 GAL3ST4Q96RP7 486 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 KCNJ15Q99712 375 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 NUDT9Q9BW91 350 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 TTTY10Q9BZA0 68 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 ZNF304Q9HCX3 659 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 NUFIP1Q9UHK0 495 aaKnown RBP12.22□□□□□ -0.45
VPS33B-202ENST00000535906 ZNF337Q9Y3M9 751 aa12.22□□□□□ -0.45
VPS33B-202ENST00000535906 FRG2CA6NGY1 282 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 SOX1O00570 391 aaPredicted RBP12.21□□□□□ -0.45
VPS33B-202ENST00000535906 PLPP2O43688 288 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 OR7A10O76100 309 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 TFP02787 698 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 FAM157BP0CG42 384 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 TCEA1P23193 301 aaKnown RBP12.21□□□□□ -0.45
VPS33B-202ENST00000535906 S100A1P23297 94 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 CXCL12P48061 93 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 MRPS15P82914 257 aaKnown RBP12.21□□□□□ -0.45
VPS33B-202ENST00000535906 TRAM1Q15629 374 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 ELAVL1Q15717 326 aaKnown RBP12.21□□□□□ -0.45
VPS33B-202ENST00000535906 NSDHLQ15738 373 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 HBMQ6B0K9 141 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 ARL9Q6T311 187 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 DPY19L2P2Q6ZN68 376 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 VASH1Q7L8A9 365 aaPredicted RBP12.21□□□□□ -0.45
VPS33B-202ENST00000535906 ATG4DQ86TL0 474 aaPredicted RBP12.21□□□□□ -0.45
VPS33B-202ENST00000535906 C17orf47Q8NEP4 570 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 UBL7Q96S82 380 aaPredicted RBP12.21□□□□□ -0.45
VPS33B-202ENST00000535906 NMNAT3Q96T66 252 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 NUDT22Q9BRQ3 303 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 DUSP15Q9H1R2 295 aaPredicted RBP12.21□□□□□ -0.45
VPS33B-202ENST00000535906 NRIP3Q9NQ35 241 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 KLHL1Q9NR64 748 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 SEMA5BQ9P283 1151 aa12.21□□□□□ -0.45
VPS33B-202ENST00000535906 ELOA3DA6NLF2 546 aaPredicted RBP12.21□□□□□ -0.46
VPS33B-202ENST00000535906 FAM47E-STBD1D6RA91 191 aa12.21□□□□□ -0.46
VPS33B-202ENST00000535906 MAGEB4O15481 346 aaPredicted RBP12.21□□□□□ -0.46
VPS33B-202ENST00000535906 ZNF264O43296 627 aa12.21□□□□□ -0.46
VPS33B-202ENST00000535906 LYRM1O43325 122 aa12.21□□□□□ -0.46
VPS33B-202ENST00000535906 PSKH1P11801 424 aa12.21□□□□□ -0.46
VPS33B-202ENST00000535906 ELK1P19419 428 aa12.21□□□□□ -0.46
VPS33B-202ENST00000535906 FBLP22087 321 aaKnown RBP12.21□□□□□ -0.46
VPS33B-202ENST00000535906 RPS4XP62701 263 aaKnown RBP12.21□□□□□ -0.46
VPS33B-202ENST00000535906 GPLD1P80108 840 aa12.21□□□□□ -0.46
VPS33B-202ENST00000535906 SF3A2Q15428 464 aaKnown RBP12.21□□□□□ -0.46
VPS33B-202ENST00000535906 ELOA3BQ3SY89 546 aa12.21□□□□□ -0.46
VPS33B-202ENST00000535906 IDNKQ5T6J7 187 aa12.21□□□□□ -0.46
VPS33B-202ENST00000535906 TRILQ7L0X0 811 aa12.21□□□□□ -0.46
VPS33B-202ENST00000535906 SLITRK4Q8IW52 837 aa12.21□□□□□ -0.46
VPS33B-202ENST00000535906 C9orf40Q8IXQ3 194 aa12.21□□□□□ -0.46
VPS33B-202ENST00000535906 NPEPL1Q8NDH3 523 aa12.21□□□□□ -0.46
VPS33B-202ENST00000535906 ELOA3Q8NG57 546 aa12.21□□□□□ -0.46
VPS33B-202ENST00000535906 ZPLD1Q8TCW7 415 aa12.21□□□□□ -0.46
VPS33B-202ENST00000535906 SLC19A3Q9BZV2 496 aa12.21□□□□□ -0.46
VPS33B-202ENST00000535906 C17orf51A8MQB3 221 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 FAM25AB3EWG3 89 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 FAM25CB3EWG5 89 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 FAM25GB3EWG6 89 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 ICOSLGO75144 302 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 FOXL2P58012 376 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 TAS2R43P59537 309 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 ERVK-25P63136 954 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 EGR4Q05215 589 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 SLC3A1Q07837 685 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 POU4F2Q12837 409 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 EBPQ15125 230 aaKnown RBP12.2□□□□□ -0.46
VPS33B-202ENST00000535906 CDK10Q15131 360 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 SHBQ15464 509 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 FAM27D1Q5T7N8 215 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 OR5J2Q8NH18 312 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 MOSPD2Q8NHP6 518 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 UBASH3BQ8TF42 649 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 KCTD12Q96CX2 325 aaKnown RBP12.2□□□□□ -0.46
VPS33B-202ENST00000535906 ZNF501Q96CX3 271 aaPredicted RBP12.2□□□□□ -0.46
VPS33B-202ENST00000535906 RASD2Q96D21 266 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 MOGAT1Q96PD6 335 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 DDOQ99489 341 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 DPYSL5Q9BPU6 564 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 RANGRFQ9HD47 186 aaPredicted RBP12.2□□□□□ -0.46
VPS33B-202ENST00000535906 FGF21Q9NSA1 209 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms