RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	RNF217	Q8TC41	542 aa		12.87	□□□□□ -0.35
CTSB-231	ENST00000534382	KTI12	Q96EK9	354 aa	Predicted RBP	12.87	□□□□□ -0.35
CTSB-231	ENST00000534382	PTDSS2	Q9BVG9	487 aa		12.87	□□□□□ -0.35
CTSB-231	ENST00000534382	OR10A4	Q9H209	315 aa		12.87	□□□□□ -0.35
CTSB-231	ENST00000534382	CLEC4M	Q9H2X3	399 aa	Predicted RBP	12.87	□□□□□ -0.35
CTSB-231	ENST00000534382	ADPRHL2	Q9NX46	363 aa		12.87	□□□□□ -0.35
CTSB-231	ENST00000534382	ZNF226	Q9NYT6	803 aa		12.87	□□□□□ -0.35
CTSB-231	ENST00000534382	PRSS50	Q9UI38	385 aa		12.87	□□□□□ -0.35
CTSB-231	ENST00000534382	ARL2BP	Q9Y2Y0	163 aa		12.87	□□□□□ -0.35
CTSB-231	ENST00000534382	TEX15	Q9BXT5	2789 aa		12.87	□□□□□ -0.35
CTSB-231	ENST00000534382	CREBBP	Q92793	2442 aa		12.87	□□□□□ -0.35
CTSB-231	ENST00000534382	FREM1	Q5H8C1	2179 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	IGKV1D-42	A0A075B6H8	117 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	ELOVL7	A1L3X0	281 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	FTCDNL1	E5RQL4	147 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	OR2T1	O43869	369 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	MRPL33	O75394	65 aa	Known RBP	12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	CNOT4	O95628	575 aa	Known RBP	12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	ADA	P00813	363 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	EDNRA	P25101	427 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	KDELR2	P33947	212 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	NTF4	P34130	210 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	RPS5	P46782	204 aa	Known RBP	12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	NUDT2	P50583	147 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	CDH12	P55289	794 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	LIPE	Q05469	1076 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	P2RY6	Q15077	328 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	NPTX1	Q15818	432 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	ENTPD8	Q5MY95	495 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	SFRP5	Q5T4F7	317 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	SWT1	Q5T5J6	900 aa	Known RBP	12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	TMEM225	Q6GV28	225 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	ZNF613	Q6PF04	617 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382		Q6ZT83	130 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	C22orf34	Q6ZV56	151 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	RBM45	Q8IUH3	476 aa	Known RBP	12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	OR4D11	Q8NGI4	311 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	VANGL1	Q8TAA9	524 aa	Predicted RBP	12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	PROX1	Q92786	737 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	SLC25A36	Q96CQ1	311 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	SF3B5	Q9BWJ5	86 aa	Known RBP	12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	ACTR6	Q9GZN1	396 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	PARPBP	Q9NWS1	579 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	BAG5	Q9UL15	447 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	SLC9A8	Q9Y2E8	581 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	FLVCR1	Q9Y5Y0	555 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	ABCA4	P78363	2273 aa		12.86	□□□□□ -0.35
CTSB-231	ENST00000534382	TRAV36DV7	A0A075B6V5	113 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	CPSF4L	A6NMK7	179 aa	Known RBP	12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	NME4	O00746	187 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	NDUFAB1	O14561	156 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	VAMP5	O95183	116 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	HRG	P04196	525 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	CRYGS	P22914	178 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	P2RY4	P51582	365 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	SLC7A2	P52569	658 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	ITGAD	Q13349	1161 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	FAM69A	Q5T7M9	428 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	CDC20B	Q86Y33	519 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	P3H2	Q8IVL5	708 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	STEAP2	Q8NFT2	490 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	TAAR8	Q969N4	342 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	APH1A	Q96BI3	265 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	ZC3HAV1L	Q96H79	300 aa	Known RBP	12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	LRRC37B	Q96QE4	947 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	PCDHAC1	Q9H158	963 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	SH3GLB1	Q9Y371	365 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	SPG11	Q96JI7	2443 aa		12.85	□□□□□ -0.35
CTSB-231	ENST00000534382	POLQ	O75417	2590 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	CHP2	O43745	196 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	FZD7	O75084	574 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	DCTN3	O75935	186 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	THBD	P07204	575 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	IL32	P24001	234 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	GTF2E2	P29084	291 aa	Known RBP	12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	TSC22D1	Q15714	1073 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	LRRC23	Q53EV4	343 aa	Predicted RBP	12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	FBXW9	Q5XUX1	488 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	LINC00114	Q6XXX2	140 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	GPAT4	Q86UL3	456 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	CDH24	Q86UP0	819 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	CARM1	Q86X55	608 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	ZIC4	Q8N9L1	334 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	OR9K2	Q8NGE7	335 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	OR6S1	Q8NH40	331 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	ADAMTS16	Q8TE57	1224 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	KISS1R	Q969F8	398 aa	Predicted RBP	12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	S100PBP	Q96BU1	408 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	CCT8L2	Q96SF2	557 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	EPYC	Q99645	322 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	USB1	Q9BQ65	265 aa	Known RBP	12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	TMEM43	Q9BTV4	400 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	ALG2	Q9H553	416 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	C6orf203	Q9P0P8	240 aa	Predicted RBP	12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	GMPR2	Q9P2T1	348 aa	Known RBP	12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	RASD1	Q9Y272	281 aa		12.84	□□□□□ -0.35
CTSB-231	ENST00000534382	TRAPPC13	A5PLN9	417 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	DEFB108A	A8MXU0	73 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	SIAH2	O43255	324 aa		12.83	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms