RNA–Protein interactions for RNA: ENST00000529944.1

PGAP2-233, Transcript of post-GPI attachment to proteins 2, human

TSL 4

Gene PGAP2, Length 539 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-233	ENST00000529944	WDR55	Q9H6Y2	383 aa	Predicted RBP	12.51	□□□□□ -0.41
PGAP2-233	ENST00000529944	CALML5	Q9NZT1	146 aa		12.51	□□□□□ -0.41
PGAP2-233	ENST00000529944	B3GALT5	Q9Y2C3	310 aa		12.51	□□□□□ -0.41
PGAP2-233	ENST00000529944	AMDHD2	Q9Y303	409 aa		12.51	□□□□□ -0.41
PGAP2-233	ENST00000529944	SLCO1B7	G3V0H7	640 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944		M0R1B8	84 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	CD5L	O43866	347 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	SSX4	O60224	188 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	SNN	O75324	88 aa	Predicted RBP	12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	GPI	P06744	558 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	PTN	P21246	168 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	CXCR1	P25024	350 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	NUDT6	P53370	316 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	FOXG1	P55316	489 aa	Predicted RBP	12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	WDR4	P57081	412 aa	Known RBP	12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	COPZ1	P61923	177 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	IRX1	P78414	480 aa	Predicted RBP	12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	LIN52	Q52LA3	116 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	PDCD4	Q53EL6	469 aa	Known RBP	12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	OTUD3	Q5T2D3	398 aa	Predicted RBP	12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	RNF220	Q5VTB9	566 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	C9orf135	Q5VTT2	229 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	NXN	Q6DKJ4	435 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	ZNF544	Q6NX49	715 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	CLEC2A	Q6UVW9	174 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	ZNF836	Q6ZNA1	936 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	DYDC1	Q8WWB3	177 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	MAGEB18	Q96M61	343 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	RHNO1	Q9BSD3	238 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	SF3B5	Q9BWJ5	86 aa	Known RBP	12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	NSRP1	Q9H0G5	558 aa	Known RBP	12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	RABEP2	Q9H5N1	569 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	PIF1	Q9H611	641 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	SLC7A10	Q9NS82	523 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	DSPP	Q9NZW4	1301 aa		12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	FBN1	P35555	2871 aa	Known RBP	12.5	□□□□□ -0.41
PGAP2-233	ENST00000529944	LIPT2	A6NK58	231 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	AQP7P3	A6NL99	342 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	SLC22A3	O75751	556 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	ANP32D	O95626	131 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	KIT	P10721	976 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	MPG	P29372	298 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	CRISP3	P54108	245 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	DSCR9	P59020	149 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	DSTN	P60981	165 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	CEACAM7	Q14002	265 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	LARS2	Q15031	903 aa	Known RBP	12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	OR7A5	Q15622	319 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	MAPK11	Q15759	364 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	ZSWIM7	Q19AV6	140 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	TSPO2	Q5TGU0	170 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	ATG16L1	Q676U5	607 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	WBP2NL	Q6ICG8	309 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	KLHL24	Q6TFL4	600 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	B3GLCT	Q6Y288	498 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	MSANTD1	Q6ZTZ1	278 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	TMEM99	Q8N816	258 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	WDR31	Q8NA23	367 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	POMGNT2	Q8NAT1	580 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	OR9K2	Q8NGE7	335 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	OR52P1P	Q8NH57	321 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	MAEL	Q96JY0	434 aa	Known RBP	12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	RMND5A	Q9H871	391 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	FKRP	Q9H9S5	495 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	CACYBP	Q9HB71	228 aa	Known RBP	12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	SLC17A5	Q9NRA2	495 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	SLC6A13	Q9NSD5	602 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	RLIM	Q9NVW2	624 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	THUMPD1	Q9NXG2	353 aa	Known RBP	12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	ZIM2	Q9NZV7	527 aa		12.49	□□□□□ -0.41
PGAP2-233	ENST00000529944	IGHV4-30-2	A0A087WSY4	118 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944		A0A096LPI6	279 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	FAM234B	A2RU67	622 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	TMEM247	A6NEH6	219 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944		H7C417	338 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	AKR7A3	O95154	331 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	BCHE	P06276	602 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	TFPT	P0C1Z6	253 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	GKN3P	P0CG01	181 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	ZCCHC18	P0CG32	403 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	BMP4	P12644	408 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	ETFA	P13804	333 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	CRAT	P43155	626 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	FABP6	P51161	128 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	MVD	P53602	400 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	RAB35	Q15286	201 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	GKAP1	Q5VSY0	366 aa	Predicted RBP	12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	AAED1	Q7RTV5	226 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	PIGW	Q7Z7B1	504 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	GPAT4	Q86UL3	456 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	LSR	Q86X29	649 aa	Predicted RBP	12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	VRK2	Q86Y07	508 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	CADM2	Q8N3J6	435 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	MGARP	Q8TDB4	240 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	SLC38A5	Q8WUX1	472 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	ITCH	Q96J02	903 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	TAPBPL	Q9BX59	468 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	C1QTNF6	Q9BXI9	259 aa		12.48	□□□□□ -0.41
PGAP2-233	ENST00000529944	ARMC7	Q9H6L4	198 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 520 ms