RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 LY6DQ14210 128 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 ITIH4Q14624 930 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 MESDQ14696 234 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 EXOSC7Q15024 291 aaKnown RBP4.77□□□□□ -1.65
PCF11-202ENST00000528336 ARMCX4Q5H9R4 360 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 PAGE2BQ5JRK9 111 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 EOGTQ5NDL2 527 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 GPR157Q5UAW9 335 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 LIPJQ5W064 366 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 RHBDD2Q6NTF9 364 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 FAM173BQ6P4H8 233 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 CCDC137Q6PK04 289 aaKnown RBP4.77□□□□□ -1.65
PCF11-202ENST00000528336 CDKL3Q8IVW4 592 aaPredicted RBP4.77□□□□□ -1.65
PCF11-202ENST00000528336 ZNF444Q8N0Y2 327 aaPredicted RBP4.77□□□□□ -1.65
PCF11-202ENST00000528336 FBXL16Q8N461 479 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 ALLCQ8N6M5 410 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 OR7G2Q8NG99 324 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 OR52B6Q8NGF0 335 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 OR4A15Q8NGL6 344 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 OR1L4Q8NGR5 311 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 ERMNQ8TAM6 284 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 ASB9Q96DX5 294 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 SLC45A3Q96JT2 553 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 C20orf24Q9BUV8 137 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 TEKT3Q9BXF9 490 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 GSDMCQ9BYG8 508 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 SHCBP1LQ9BZQ2 653 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 DPEP2Q9H4A9 486 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 C5orf66Q9H5L9 145 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 CD209Q9NNX6 404 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 GGA2Q9UJY4 613 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 GSTK1Q9Y2Q3 226 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 WDR45Q9Y484 360 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 MAD1L1Q9Y6D9 718 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 A0A1B0GUL6 1792 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 GOLGA8QA0A0J9YX86 632 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 hCG_38984A0A1B0GV85 526 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 A0A1B0GVL5 298 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 ATP6AP2A0A1C7CYW4 349 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 TMEM120BA0PK00 339 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 TRPC5OSA6NMA1 111 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 K7EQD1 137 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 SCN2BO60939 215 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 GRAP2O75791 330 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 SBF1O95248 1867 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 AHSA1O95433 338 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 LCA5LO95447 670 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 ANP32DO95626 131 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 TXNDC12O95881 172 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 HPRP00739 348 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 GOT1P17174 413 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 CCNOP22674 350 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 RPS12P25398 132 aaKnown RBP4.76□□□□□ -1.65
PCF11-202ENST00000528336 OXTRP30559 389 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 CASP14P31944 242 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 CRYBB2P43320 205 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 ARRB1P49407 418 aaPredicted RBP4.76□□□□□ -1.65
PCF11-202ENST00000528336 FHITP49789 147 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 NDST1P52848 882 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 DSTNP60981 165 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 FKBP1AP62942 108 aaKnown RBP4.76□□□□□ -1.65
PCF11-202ENST00000528336 SKP1P63208 163 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 NAAAQ02083 359 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 DMC1Q14565 340 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 SPHARQ15513 63 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 SLC1A5Q15758 541 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 PSG3Q16557 428 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 CDKN3Q16667 212 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 ZSCAN26Q16670 478 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 C18orf21Q32NC0 220 aaPredicted RBP4.76□□□□□ -1.65
PCF11-202ENST00000528336 LRRC37A5PQ49AS3 106 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 ACSF3Q4G176 576 aaPredicted RBP4.76□□□□□ -1.65
PCF11-202ENST00000528336 SMUG1Q53HV7 270 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 SNRNP48Q6IEG0 339 aaKnown RBP4.76□□□□□ -1.65
PCF11-202ENST00000528336 OR4F3Q6IEY1 312 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 OR2A2Q6IF42 318 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 H3F3CQ6NXT2 135 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 CYP4V2Q6ZWL3 525 aaPredicted RBP4.76□□□□□ -1.65
PCF11-202ENST00000528336 H2BFWTQ7Z2G1 175 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 COX8CQ7Z4L0 72 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 GOLGA7Q7Z5G4 137 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 ZFAND4Q86XD8 727 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 RBM45Q8IUH3 476 aaKnown RBP4.76□□□□□ -1.65
PCF11-202ENST00000528336 LRRC8AQ8IWT6 810 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 ZC3H3Q8IXZ2 948 aaKnown RBP4.76□□□□□ -1.65
PCF11-202ENST00000528336 GPR65Q8IYL9 337 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 SPEM1Q8N4L4 309 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 ZNF781Q8N8C0 355 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 SMYD1Q8NB12 490 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 PROKR2Q8NFJ6 384 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 OR2L3Q8NG85 312 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 KIFAP3Q92845 792 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 FAM122AQ96E09 287 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 CERS2Q96G23 380 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 PPP1R16AQ96I34 528 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 AMDHD1Q96NU7 426 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 S1PR3Q99500 378 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 LGMNQ99538 433 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 IL1RL2Q9HB29 575 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 LPAR2Q9HBW0 351 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms