RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 NCF2P19878 526 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC4-208ENST00000527680 APOBEC3AP31941 199 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC4-208ENST00000527680 BNIP2Q12982 314 aa19.61■□□□□ 0.73
TRAPPC4-208ENST00000527680 CHRFAM7AQ494W8 412 aa19.61■□□□□ 0.73
TRAPPC4-208ENST00000527680 POMGNT2Q8NAT1 580 aa19.61■□□□□ 0.73
TRAPPC4-208ENST00000527680 OR9K2Q8NGE7 335 aa19.61■□□□□ 0.73
TRAPPC4-208ENST00000527680 MGARPQ8TDB4 240 aa19.61■□□□□ 0.73
TRAPPC4-208ENST00000527680 AURKBQ96GD4 344 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC4-208ENST00000527680 SF3B5Q9BWJ5 86 aaKnown RBP19.61■□□□□ 0.73
TRAPPC4-208ENST00000527680 TMEM247A6NEH6 219 aa19.6■□□□□ 0.73
TRAPPC4-208ENST00000527680 LIPT2A6NK58 231 aa19.6■□□□□ 0.73
TRAPPC4-208ENST00000527680 KLF11O14901 512 aa19.6■□□□□ 0.73
TRAPPC4-208ENST00000527680 ETFAP13804 333 aa19.6■□□□□ 0.73
TRAPPC4-208ENST00000527680 CRISP3P54108 245 aa19.6■□□□□ 0.73
TRAPPC4-208ENST00000527680 LARS2Q15031 903 aaKnown RBP19.6■□□□□ 0.73
TRAPPC4-208ENST00000527680 LIN52Q52LA3 116 aa19.6■□□□□ 0.73
TRAPPC4-208ENST00000527680 TNFAIP8L3Q5GJ75 292 aa19.6■□□□□ 0.73
TRAPPC4-208ENST00000527680 WBP2NLQ6ICG8 309 aa19.6■□□□□ 0.73
TRAPPC4-208ENST00000527680 ABHD12BQ7Z5M8 362 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC4-208ENST00000527680 ZNF525Q8N782 197 aa19.6■□□□□ 0.73
TRAPPC4-208ENST00000527680 FAM168AQ92567 244 aa19.6■□□□□ 0.73
TRAPPC4-208ENST00000527680 TMEM45BQ96B21 275 aa19.6■□□□□ 0.73
TRAPPC4-208ENST00000527680 ZNF385AQ96PM9 386 aaKnown RBP19.6■□□□□ 0.73
TRAPPC4-208ENST00000527680 TNFRSF13CQ96RJ3 184 aa19.6■□□□□ 0.73
TRAPPC4-208ENST00000527680 AMBRA1Q9C0C7 1298 aa19.6■□□□□ 0.73
TRAPPC4-208ENST00000527680 ARMC7Q9H6L4 198 aa19.6■□□□□ 0.73
TRAPPC4-208ENST00000527680 CDHR4A6H8M9 788 aa19.59■□□□□ 0.73
TRAPPC4-208ENST00000527680 A8MVM7 634 aa19.59■□□□□ 0.73
TRAPPC4-208ENST00000527680 SLCO1B7G3V0H7 640 aa19.59■□□□□ 0.73
TRAPPC4-208ENST00000527680 BCHEP06276 602 aa19.59■□□□□ 0.73
TRAPPC4-208ENST00000527680 IDO1P14902 403 aa19.59■□□□□ 0.73
TRAPPC4-208ENST00000527680 DSTNP60981 165 aa19.59■□□□□ 0.73
TRAPPC4-208ENST00000527680 ATG16L1Q676U5 607 aa19.59■□□□□ 0.73
TRAPPC4-208ENST00000527680 ZNF836Q6ZNA1 936 aa19.59■□□□□ 0.73
TRAPPC4-208ENST00000527680 ZIC4Q8N9L1 334 aa19.59■□□□□ 0.73
TRAPPC4-208ENST00000527680 KCNS3Q9BQ31 491 aa19.59■□□□□ 0.73
TRAPPC4-208ENST00000527680 RMND5AQ9H871 391 aa19.59■□□□□ 0.73
TRAPPC4-208ENST00000527680 TPT1P8Q9HAU6 139 aa19.59■□□□□ 0.73
TRAPPC4-208ENST00000527680 SLC6A13Q9NSD5 602 aa19.59■□□□□ 0.73
TRAPPC4-208ENST00000527680 TMEM45AQ9NWC5 275 aa19.59■□□□□ 0.73
TRAPPC4-208ENST00000527680 MOKQ9UQ07 419 aa19.59■□□□□ 0.73
TRAPPC4-208ENST00000527680 COL6A5A8TX70 2615 aa19.58■□□□□ 0.73
TRAPPC4-208ENST00000527680 AQP7P3A6NL99 342 aa19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 RNF212BA8MTL3 300 aa19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 ATP6V1G2-DDX39BF2Z307 99 aa19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 H7C417 338 aa19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 SLC25A16P16260 332 aa19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 ACAA2P42765 397 aaKnown RBP19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 WDR4P57081 412 aaKnown RBP19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 SLC25A3Q00325 362 aa19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 TMEM249Q2WGJ8 235 aa19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 PDCD4Q53EL6 469 aaKnown RBP19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 HIKESHIQ53FT3 197 aa19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 CLIP4Q8N3C7 705 aa19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 SLC38A5Q8WUX1 472 aa19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 FBXO17Q96EF6 278 aa19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 ITCHQ96J02 903 aa19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 KCNK17Q96T54 332 aa19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 REPIN1Q9BWE0 567 aaKnown RBP19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 MANSC1Q9H8J5 431 aa19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 PRDM4Q9UKN5 801 aa19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 ZNF443Q9Y2A4 671 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 ATRQ13535 2644 aa19.58■□□□□ 0.72
TRAPPC4-208ENST00000527680 DNHD1Q96M86 4753 aa19.57■□□□□ 0.72
TRAPPC4-208ENST00000527680 TMEM120BA0PK00 339 aa19.57■□□□□ 0.72
TRAPPC4-208ENST00000527680 TFPTP0C1Z6 253 aa19.57■□□□□ 0.72
TRAPPC4-208ENST00000527680 EFNA4P52798 201 aa19.57■□□□□ 0.72
TRAPPC4-208ENST00000527680 LOXL1Q08397 574 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC4-208ENST00000527680 MAPK11Q15759 364 aa19.57■□□□□ 0.72
TRAPPC4-208ENST00000527680 ZSWIM7Q19AV6 140 aa19.57■□□□□ 0.72
TRAPPC4-208ENST00000527680 C6orf10Q5SRN2 563 aa19.57■□□□□ 0.72
TRAPPC4-208ENST00000527680 C1QTNF12Q5T7M4 302 aa19.57■□□□□ 0.72
TRAPPC4-208ENST00000527680 C1orf140Q5VVS0 124 aa19.57■□□□□ 0.72
TRAPPC4-208ENST00000527680 PIF1Q9H611 641 aa19.57■□□□□ 0.72
TRAPPC4-208ENST00000527680 A0A0G2JPF8 293 aa19.56■□□□□ 0.72
TRAPPC4-208ENST00000527680 ELOA3DA6NLF2 546 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC4-208ENST00000527680 HNRNPCL2B2RXH8 293 aa19.56■□□□□ 0.72
TRAPPC4-208ENST00000527680 HNRNPCL3B7ZW38 293 aa19.56■□□□□ 0.72
TRAPPC4-208ENST00000527680 ZNF587BE7ETH6 402 aa19.56■□□□□ 0.72
TRAPPC4-208ENST00000527680 HNRNPCL1O60812 293 aaKnown RBP19.56■□□□□ 0.72
TRAPPC4-208ENST00000527680 VAMP5O95183 116 aa19.56■□□□□ 0.72
TRAPPC4-208ENST00000527680 HNRNPCL4P0DMR1 293 aa19.56■□□□□ 0.72
TRAPPC4-208ENST00000527680 PRG2P13727 222 aa19.56■□□□□ 0.72
TRAPPC4-208ENST00000527680 UBE2NP61088 152 aaKnown RBP19.56■□□□□ 0.72
TRAPPC4-208ENST00000527680 ELOA3BQ3SY89 546 aa19.56■□□□□ 0.72
TRAPPC4-208ENST00000527680 RPS26P11Q5JNZ5 115 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC4-208ENST00000527680 PRAMEF8Q5VWM4 474 aa19.56■□□□□ 0.72
TRAPPC4-208ENST00000527680 PRAMEF7Q5VXH5 474 aa19.56■□□□□ 0.72
TRAPPC4-208ENST00000527680 ELOA3Q8NG57 546 aa19.56■□□□□ 0.72
TRAPPC4-208ENST00000527680 SLC25A36Q96CQ1 311 aa19.56■□□□□ 0.72
TRAPPC4-208ENST00000527680 THUMPD1Q9NXG2 353 aaKnown RBP19.56■□□□□ 0.72
TRAPPC4-208ENST00000527680 FBN1P35555 2871 aaKnown RBP19.55■□□□□ 0.72
TRAPPC4-208ENST00000527680 SNNO75324 88 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC4-208ENST00000527680 LGI1O95970 557 aa19.55■□□□□ 0.72
TRAPPC4-208ENST00000527680 ZCCHC18P0CG32 403 aa19.55■□□□□ 0.72
TRAPPC4-208ENST00000527680 POLR2JP52435 117 aaKnown RBP19.55■□□□□ 0.72
TRAPPC4-208ENST00000527680 MVDP53602 400 aa19.55■□□□□ 0.72
TRAPPC4-208ENST00000527680 SLC9B1Q4ZJI4 515 aa19.55■□□□□ 0.72
TRAPPC4-208ENST00000527680 C6orf52Q5T4I8 152 aa19.55■□□□□ 0.72
TRAPPC4-208ENST00000527680 CYB5R2Q6BCY4 276 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms