RNA–Protein interactions for RNA: ENST00000523699.5

CDK16-222, Transcript of cyclin dependent kinase 16, human

TSL 5

Gene CDK16, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-222	ENST00000523699	ETFA	P13804	333 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	SLC25A16	P16260	332 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	GTF2E2	P29084	291 aa	Known RBP	13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	NTF4	P34130	210 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	IRX1	P78414	480 aa	Predicted RBP	13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	TMEM225	Q6GV28	225 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	C11orf71	Q6IPW1	123 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	B3GLCT	Q6Y288	498 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	CXXC5	Q7LFL8	322 aa	Known RBP	13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	VRK2	Q86Y07	508 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	ZBTB9	Q96C00	473 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	MDFI	Q99750	246 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	ADAM19	Q9H013	955 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	RAD21L1	Q9H4I0	556 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	TPT1P8	Q9HAU6	139 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	OBP2B	Q9NPH6	170 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	RLIM	Q9NVW2	624 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	ZIM2	Q9NZV7	527 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	ADAM21	Q9UKJ8	722 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	RAB21	Q9UL25	225 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	ARID1A	O14497	2285 aa		13.74	□□□□□ -0.21
CDK16-222	ENST00000523699	IGHV4-30-2	A0A087WSY4	118 aa		13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	OR6C65	A6NJZ3	312 aa		13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	ZNF587B	E7ETH6	402 aa		13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	SNN	O75324	88 aa	Predicted RBP	13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	AHSA1	O95433	338 aa		13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	GKN3P	P0CG01	181 aa		13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	ZCCHC18	P0CG32	403 aa		13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	CDH2	P19022	906 aa	Predicted RBP	13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	PAX7	P23759	505 aa		13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	FOXG1	P55316	489 aa	Predicted RBP	13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	PRAMEF8	Q5VWM4	474 aa		13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	PRAMEF7	Q5VXH5	474 aa		13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	PODNL1	Q6PEZ8	512 aa		13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	TMEM99	Q8N816	258 aa		13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	FAM168A	Q92567	244 aa		13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	MOV10	Q9HCE1	1003 aa	Known RBP	13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	TMEM45A	Q9NWC5	275 aa		13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	IFT52	Q9Y366	437 aa		13.73	□□□□□ -0.21
CDK16-222	ENST00000523699	FKBP7	Q9Y680	259 aa		13.73	□□□□□ -0.21
CDK16-222	ENST00000523699		A0A0G2JPF8	293 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	HNRNPCL2	B2RXH8	293 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	HNRNPCL3	B7ZW38	293 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	C5orf58	C9J3I9	102 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	ATP6V1G2-DDX39B	F2Z307	99 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	UBD	O15205	165 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	FRS3	O43559	492 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	HNRNPCL1	O60812	293 aa	Known RBP	13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	HNRNPCL4	P0DMR1	293 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	APOBEC3A	P31941	199 aa	Predicted RBP	13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	WDR4	P57081	412 aa	Known RBP	13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	UBE2N	P61088	152 aa	Known RBP	13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	STX1B	P61266	288 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	SNRPD2	P62316	118 aa	Known RBP	13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	CHRFAM7A	Q494W8	412 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	C1orf140	Q5VVS0	124 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	HMBOX1	Q6NT76	420 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	MIER2	Q8N344	545 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	WDR31	Q8NA23	367 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	SLC38A5	Q8WUX1	472 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	AURKB	Q96GD4	344 aa	Predicted RBP	13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	TMEM19	Q96HH6	336 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	MAEL	Q96JY0	434 aa	Known RBP	13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	ZNF385A	Q96PM9	386 aa	Known RBP	13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	SPATA9	Q9BWV2	254 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	MANSC1	Q9H8J5	431 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	SDR39U1	Q9NRG7	319 aa	Predicted RBP	13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	RASD1	Q9Y272	281 aa		13.72	□□□□□ -0.21
CDK16-222	ENST00000523699	TFPT	P0C1Z6	253 aa		13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	POLR2J	P52435	117 aa	Known RBP	13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	EFNA4	P52798	201 aa		13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	SLC18A1	P54219	525 aa		13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	SLC25A3	Q00325	362 aa		13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	LOXL1	Q08397	574 aa	Predicted RBP	13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	TMEM249	Q2WGJ8	235 aa		13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	HIKESHI	Q53FT3	197 aa		13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	ZNF311	Q5JNZ3	666 aa		13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	C6orf52	Q5T4I8	152 aa		13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	HIPK1	Q86Z02	1210 aa		13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	ZNF525	Q8N782	197 aa		13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	OR10H5	Q8NGA6	315 aa		13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	SPATA3	Q8NHX4	192 aa		13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	BBS10	Q8TAM1	723 aa		13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	TNFRSF13C	Q96RJ3	184 aa		13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	RPS6KB2	Q9UBS0	482 aa		13.71	□□□□□ -0.21
CDK16-222	ENST00000523699	ZAN	Q9Y493	2812 aa		13.71	□□□□□ -0.22
CDK16-222	ENST00000523699	JMJD1C	Q15652	2540 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	ELOA3D	A6NLF2	546 aa	Predicted RBP	13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	CRYAA	P02489	173 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	ACAA2	P42765	397 aa	Known RBP	13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	MVD	P53602	400 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	SH3BGR	P55822	239 aa	Predicted RBP	13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	BNIP2	Q12982	314 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	FADD	Q13158	208 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	MAPK11	Q15759	364 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	ELOA3B	Q3SY89	546 aa		13.7	□□□□□ -0.22
CDK16-222	ENST00000523699	TBRG1	Q3YBR2	411 aa		13.7	□□□□□ -0.22

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