RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 OR8G3PP0DMU2 310 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 P2RX1P51575 399 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 EXOSC7Q15024 291 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 PLPP4Q5VZY2 271 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 RGS7BPQ6MZT1 257 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZNF546Q86UE3 836 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 TSEN15Q8WW01 171 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 ADAD1Q96M93 576 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 NKX3-1Q99801 234 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 FARSAQ9Y285 508 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 PLEKHA6Q9Y2H5 1048 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 TBC1D3KA0A087X1G2 549 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 PLSCR5A0PG75 271 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 TBC1D3FA6NER0 549 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 PRAMEF2O60811 474 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 AGR2O95994 175 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZNF888P0CJ79 500 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 HIST1H1CP16403 213 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 RAB3AP20336 220 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 SP3Q02447 781 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 POU4F2Q12837 409 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 FZD5Q13467 585 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 MLC1Q15049 377 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 TBC1D3GQ6DHY5 549 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 RPL22L1Q6P5R6 122 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 ASPGQ86U10 573 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 BVESQ8NE79 360 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 LCN9Q8WX39 176 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 SDF2Q99470 211 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 SRA1Q9HD15 236 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 NOP16Q9Y3C1 178 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 HCFC2Q9Y5Z7 792 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 AUP1Q9Y679 476 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 ATG2BQ96BY7 2078 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 A0A0C4DFX4 3053 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 TRAV1-2A0A0B4J238 106 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 AIPO00170 330 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 GMFGO60234 142 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 HLA-DQA2P01906 255 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 DBIP07108 87 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 SLC35G6P0C7Q6 338 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 DCST2Q5T1A1 773 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 RAB12Q6IQ22 244 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZNF627Q7L945 461 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 FAM71CQ8NEG0 241 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 PXT1Q8NFP0 134 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 OR51S1Q8NGJ8 323 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 OR2A1Q8NGT9 310 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 THEM6Q8WUY1 208 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 MRGPRX3Q96LB0 322 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 PELOQ9BRX2 385 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 LDAHQ9H6V9 325 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 EVA1AQ9H8M9 152 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 DEC1Q9P2X7 70 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 SIGLEC7Q9Y286 467 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 PLEKHM1Q9Y4G2 1056 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 TRPM6Q9BX84 2022 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 OR14I1A6ND48 311 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 TUBAL3A6NHL2 446 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 ELOA3DA6NLF2 546 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 C4orf51C9J302 202 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 RLN2P04090 185 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 GABRA1P14867 456 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 CD53P19397 219 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 TAS2R20P59543 309 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZNF234Q14588 700 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 DHCR24Q15392 516 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 ELOA3BQ3SY89 546 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 ERN2Q76MJ5 926 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZNF511Q8NB15 262 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 ELOA3Q8NG57 546 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 NKD1Q969G9 470 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 SEC22AQ96IW7 307 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 MYEF2Q9P2K5 600 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 NCDNQ9UBB6 729 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 CA5BQ9Y2D0 317 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 OR10H2O60403 315 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZIC2O95409 532 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 HIST1H2ABP04908 130 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 INHAP05111 366 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 GAAP10253 952 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 ADH5P11766 374 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 LAG3P18627 525 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 HTR2AP28223 471 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 CDK3Q00526 305 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 RBMS2Q15434 407 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 ETFDHQ16134 617 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 CCDC157Q569K6 752 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 HIST3H2AQ7L7L0 130 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 OVCH1Q7RTY7 1134 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 TMEM17Q86X19 198 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZNF619Q8N2I2 560 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 HIST1H2ACQ93077 130 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 SHARPINQ9H0F6 387 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZNF768Q9H5H4 540 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 PRDM7Q9NQW5 492 aa11.81□□□□□ -0.52
TRAPPC9-208ENST00000520857 FAM74A7A6NL05 159 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 OR2AT4A6NND4 320 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms