RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 FTCDNL1E5RQL4 147 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 KLF4O43474 513 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 CCNB2O95067 398 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 BGLAPP02818 100 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 TFPIP10646 304 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 ZNF23P17027 643 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 MAKP20794 623 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 CBLP22681 906 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 PEX2P28328 305 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 PTGER4P35408 488 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 GPR4P46093 362 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 EIF1AXP47813 144 aaKnown RBP13.73□□□□□ -0.21
LSM1-203ENST00000520755 MAP2K6P52564 334 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 CTBP2P56545 445 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 RPS3AP61247 264 aaKnown RBP13.73□□□□□ -0.21
LSM1-203ENST00000520755 PRKCDQ05655 676 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 MYBPHQ13203 477 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 SF3B4Q15427 424 aaKnown RBP eCLIP13.73□□□□□ -0.21
LSM1-203ENST00000520755 ACSF3Q4G176 576 aaPredicted RBP13.73□□□□□ -0.21
LSM1-203ENST00000520755 FBXW10Q5XX13 1052 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 RTL6Q6ICC9 239 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 PPP4R4Q6NUP7 873 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 PLXDC2Q6UX71 529 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 RPTNQ6XPR3 784 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 ESPNLQ6ZVH7 1005 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 ZER1Q7Z7L7 766 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 OR10G2Q8NGC3 310 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 ZPLD1Q8TCW7 415 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 TAAR8Q969N4 342 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 FAM46AQ96IP4 442 aaKnown RBP13.73□□□□□ -0.21
LSM1-203ENST00000520755 HS6ST2Q96MM7 605 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 MOGAT1Q96PD6 335 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 PDP1Q9P0J1 537 aaPredicted RBP13.73□□□□□ -0.21
LSM1-203ENST00000520755 SLC5A6Q9Y289 635 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 MED31Q9Y3C7 131 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 FAM215AQ9Y5M1 114 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 MED12LQ86YW9 2145 aa13.73□□□□□ -0.21
LSM1-203ENST00000520755 TRAV36DV7A0A075B6V5 113 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 CLCA1A8K7I4 914 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 E9PLN8 166 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 PDLIM1O00151 329 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 CDC42EP2O14613 210 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 CASQ2O14958 399 aaPredicted RBP13.72□□□□□ -0.21
LSM1-203ENST00000520755 IGF2P01344 180 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 IFI30P13284 250 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 FUT1P19526 365 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 KLK2P20151 261 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 PRKACGP22612 351 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 RPS5P46782 204 aaKnown RBP13.72□□□□□ -0.21
LSM1-203ENST00000520755 SGCBQ16585 318 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 ZNF74Q16587 644 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 PDSS1Q5T2R2 415 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 HBMQ6B0K9 141 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 B3GNT6Q6ZMB0 384 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 RNF113BQ8IZP6 322 aaKnown RBP13.72□□□□□ -0.21
LSM1-203ENST00000520755 SVOPLQ8N434 492 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 OR10D3Q8NH80 312 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 OR2V1Q8NHB1 315 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 GIPC3Q8TF64 312 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 NRG4Q8WWG1 115 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 DDIT4LQ96D03 193 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 NRBF2Q96F24 287 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 ZNF845Q96IR2 970 aaPredicted RBP13.72□□□□□ -0.21
LSM1-203ENST00000520755 OR5B2Q96R09 309 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 CIB1Q99828 191 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 VKORC1Q9BQB6 163 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 SRXN1Q9BYN0 137 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 POTEKPQ9BYX7 375 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 SEC14L4Q9UDX3 406 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 ERRFI1Q9UJM3 462 aaPredicted RBP13.72□□□□□ -0.21
LSM1-203ENST00000520755 TMCC3Q9ULS5 477 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 HIVEP3Q5T1R4 2406 aa13.72□□□□□ -0.21
LSM1-203ENST00000520755 LIPT2A6NK58 231 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 SOCS2O14508 198 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 CXCL13O43927 109 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 OR10H3O60404 316 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 AHSA1O95433 338 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 HOXD4P09016 255 aaPredicted RBP13.71□□□□□ -0.21
LSM1-203ENST00000520755 IDUAP35475 653 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 PPP2R2BQ00005 443 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 SLC34A1Q06495 639 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 PMPCAQ10713 525 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 FHL1Q13642 323 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 TRIP10Q15642 601 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 LPCAT4Q643R3 524 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 C1orf94Q6P1W5 598 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 FAHD1Q6P587 224 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 C5orf46Q6UWT4 87 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 P4HA3Q7Z4N8 544 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 HIPK1Q86Z02 1210 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 MARVELD2Q8N4S9 558 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 AQP11Q8NBQ7 271 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 PIGXQ8TBF5 258 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 BPIFA2Q96DR5 249 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 DMRTA2Q96SC8 542 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 FEVQ99581 238 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 NIPSNAP1Q9BPW8 284 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 TTYH2Q9BSA4 534 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 HDGFL3Q9Y3E1 203 aa13.71□□□□□ -0.21
LSM1-203ENST00000520755 ZNF814B7Z6K7 855 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms