RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 LIPHQ8WWY8 451 aa8.84□□□□□ -0.99
CLN8-202ENST00000517514 ROBO4Q8WZ75 1007 aa8.84□□□□□ -0.99
CLN8-202ENST00000517514 DDIT4LQ96D03 193 aa8.84□□□□□ -0.99
CLN8-202ENST00000517514 HS6ST2Q96MM7 605 aa8.84□□□□□ -0.99
CLN8-202ENST00000517514 ALPK1Q96QP1 1244 aa8.84□□□□□ -0.99
CLN8-202ENST00000517514 DMRTA2Q96SC8 542 aa8.84□□□□□ -0.99
CLN8-202ENST00000517514 SLC19A3Q9BZV2 496 aa8.84□□□□□ -0.99
CLN8-202ENST00000517514 OSGIN2Q9Y236 505 aa8.84□□□□□ -0.99
CLN8-202ENST00000517514 SPIN1Q9Y657 262 aaPredicted RBP8.84□□□□□ -0.99
CLN8-202ENST00000517514 U3KQV3 271 aa8.84□□□□□ -0.99
CLN8-202ENST00000517514 MYO7BQ6PIF6 2116 aa8.83□□□□□ -1
CLN8-202ENST00000517514 GJE1A6NN92 205 aa8.83□□□□□ -1
CLN8-202ENST00000517514 ZNF716A6NP11 495 aa8.83□□□□□ -1
CLN8-202ENST00000517514 MS4A18H0YCH9 400 aa8.83□□□□□ -1
CLN8-202ENST00000517514 SULT2B1O00204 365 aa8.83□□□□□ -1
CLN8-202ENST00000517514 HNRNPRO43390 633 aaKnown RBP8.83□□□□□ -1
CLN8-202ENST00000517514 OR7A10O76100 309 aa8.83□□□□□ -1
CLN8-202ENST00000517514 AKR7A3O95154 331 aa8.83□□□□□ -1
CLN8-202ENST00000517514 AHSA1O95433 338 aa8.83□□□□□ -1
CLN8-202ENST00000517514 CH25HO95992 272 aa8.83□□□□□ -1
CLN8-202ENST00000517514 HPRP00739 348 aa8.83□□□□□ -1
CLN8-202ENST00000517514 ASAH2BP0C7U1 165 aa8.83□□□□□ -1
CLN8-202ENST00000517514 GLI4P10075 376 aa8.83□□□□□ -1
CLN8-202ENST00000517514 HOXB6P17509 224 aaKnown RBP8.83□□□□□ -1
CLN8-202ENST00000517514 FKBP2P26885 142 aaKnown RBP8.83□□□□□ -1
CLN8-202ENST00000517514 ACVR2AP27037 513 aa8.83□□□□□ -1
CLN8-202ENST00000517514 GRPRP30550 384 aa8.83□□□□□ -1
CLN8-202ENST00000517514 NTF4P34130 210 aa8.83□□□□□ -1
CLN8-202ENST00000517514 IDUAP35475 653 aa8.83□□□□□ -1
CLN8-202ENST00000517514 GCKP35557 465 aa8.83□□□□□ -1
CLN8-202ENST00000517514 CA7P43166 264 aa8.83□□□□□ -1
CLN8-202ENST00000517514 GPR4P46093 362 aa8.83□□□□□ -1
CLN8-202ENST00000517514 OR2B6P58173 313 aa8.83□□□□□ -1
CLN8-202ENST00000517514 PON3Q15166 354 aa8.83□□□□□ -1
CLN8-202ENST00000517514 GUSBP1Q15486 140 aa8.83□□□□□ -1
CLN8-202ENST00000517514 EIF2S3LQ2VIR3 472 aaKnown RBP8.83□□□□□ -1
CLN8-202ENST00000517514 MS4A18Q3C1V0 323 aa8.83□□□□□ -1
CLN8-202ENST00000517514 FAM69AQ5T7M9 428 aa8.83□□□□□ -1
CLN8-202ENST00000517514 C1orf185Q5T7R7 199 aa8.83□□□□□ -1
CLN8-202ENST00000517514 NSUN5P2Q63ZY6 315 aa8.83□□□□□ -1
CLN8-202ENST00000517514 ZFP1Q6P2D0 407 aa8.83□□□□□ -1
CLN8-202ENST00000517514 ZNF585AQ6P3V2 769 aa8.83□□□□□ -1
CLN8-202ENST00000517514 PGBD2Q6P3X8 592 aa8.83□□□□□ -1
CLN8-202ENST00000517514 ZNF730Q6ZMV8 503 aa8.83□□□□□ -1
CLN8-202ENST00000517514 TMPRSS11FQ6ZWK6 438 aa8.83□□□□□ -1
CLN8-202ENST00000517514 EPHX4Q8IUS5 362 aa8.83□□□□□ -1
CLN8-202ENST00000517514 PM20D2Q8IYS1 436 aa8.83□□□□□ -1
CLN8-202ENST00000517514 RNF113BQ8IZP6 322 aaKnown RBP8.83□□□□□ -1
CLN8-202ENST00000517514 TMEM99Q8N816 258 aa8.83□□□□□ -1
CLN8-202ENST00000517514 NAXEQ8NCW5 288 aa8.83□□□□□ -1
CLN8-202ENST00000517514 EPYCQ99645 322 aa8.83□□□□□ -1
CLN8-202ENST00000517514 ENKD1Q9H0I2 346 aa8.83□□□□□ -1
CLN8-202ENST00000517514 ALKBH4Q9NXW9 302 aa8.83□□□□□ -1
CLN8-202ENST00000517514 SELENONQ9NZV5 590 aa8.83□□□□□ -1
CLN8-202ENST00000517514 B3GAT1Q9P2W7 334 aa8.83□□□□□ -1
CLN8-202ENST00000517514 MED31Q9Y3C7 131 aa8.83□□□□□ -1
CLN8-202ENST00000517514 SAMHD1Q9Y3Z3 626 aaKnown RBP8.83□□□□□ -1
CLN8-202ENST00000517514 FREM1Q5H8C1 2179 aa8.83□□□□□ -1
CLN8-202ENST00000517514 INTS1Q8N201 2190 aaKnown RBP8.83□□□□□ -1
CLN8-202ENST00000517514 MBD3L4A6NDZ8 208 aaPredicted RBP8.82□□□□□ -1
CLN8-202ENST00000517514 MBD3L3A6NE82 208 aaPredicted RBP8.82□□□□□ -1
CLN8-202ENST00000517514 MBD3L5A6NJ08 208 aaPredicted RBP8.82□□□□□ -1
CLN8-202ENST00000517514 CD8B2A6NJW9 211 aa8.82□□□□□ -1
CLN8-202ENST00000517514 AQP7P3A6NL99 342 aa8.82□□□□□ -1
CLN8-202ENST00000517514 M0R082 166 aa8.82□□□□□ -1
CLN8-202ENST00000517514 PRRG2O14669 202 aa8.82□□□□□ -1
CLN8-202ENST00000517514 DNPH1O43598 174 aa8.82□□□□□ -1
CLN8-202ENST00000517514 CYTIPO60759 359 aa8.82□□□□□ -1
CLN8-202ENST00000517514 WDR1O75083 606 aa8.82□□□□□ -1
CLN8-202ENST00000517514 PTP4A3O75365 173 aa8.82□□□□□ -1
CLN8-202ENST00000517514 DEAF1O75398 565 aaPredicted RBP8.82□□□□□ -1
CLN8-202ENST00000517514 LDLRP01130 860 aa8.82□□□□□ -1
CLN8-202ENST00000517514 GASTP01350 101 aa8.82□□□□□ -1
CLN8-202ENST00000517514 TP53P04637 393 aaPredicted RBP8.82□□□□□ -1
CLN8-202ENST00000517514 IFI30P13284 250 aa8.82□□□□□ -1
CLN8-202ENST00000517514 HLA-DOBP13765 273 aa8.82□□□□□ -1
CLN8-202ENST00000517514 PRKACGP22612 351 aa8.82□□□□□ -1
CLN8-202ENST00000517514 FASP25445 335 aa8.82□□□□□ -1
CLN8-202ENST00000517514 DNAJA1P31689 397 aaKnown RBP8.82□□□□□ -1
CLN8-202ENST00000517514 UQCRC1P31930 480 aa8.82□□□□□ -1
CLN8-202ENST00000517514 CEACAM8P31997 349 aaPredicted RBP8.82□□□□□ -1
CLN8-202ENST00000517514 GSSP48637 474 aa8.82□□□□□ -1
CLN8-202ENST00000517514 NUP107P57740 925 aa8.82□□□□□ -1
CLN8-202ENST00000517514 SMIM11AP58511 58 aa8.82□□□□□ -1
CLN8-202ENST00000517514 SLC35A1P78382 337 aa8.82□□□□□ -1
CLN8-202ENST00000517514 ABLIM2Q6H8Q1 611 aa8.82□□□□□ -1
CLN8-202ENST00000517514 C1orf94Q6P1W5 598 aa8.82□□□□□ -1
CLN8-202ENST00000517514 PAQR6Q6TCH4 344 aa8.82□□□□□ -1
CLN8-202ENST00000517514 C5orf46Q6UWT4 87 aa8.82□□□□□ -1
CLN8-202ENST00000517514 KDM8Q8N371 416 aa8.82□□□□□ -1
CLN8-202ENST00000517514 ZIC4Q8N9L1 334 aa8.82□□□□□ -1
CLN8-202ENST00000517514 MOSPD2Q8NHP6 518 aa8.82□□□□□ -1
CLN8-202ENST00000517514 MBD3L2Q8NHZ7 208 aaPredicted RBP8.82□□□□□ -1
CLN8-202ENST00000517514 ZNF417Q8TAU3 575 aa8.82□□□□□ -1
CLN8-202ENST00000517514 RNF128Q8TEB7 428 aa8.82□□□□□ -1
CLN8-202ENST00000517514 SLC25A36Q96CQ1 311 aa8.82□□□□□ -1
CLN8-202ENST00000517514 BPIFA2Q96DR5 249 aa8.82□□□□□ -1
CLN8-202ENST00000517514 SGTBQ96EQ0 304 aa8.82□□□□□ -1
CLN8-202ENST00000517514 FAM46AQ96IP4 442 aaKnown RBP8.82□□□□□ -1
CLN8-202ENST00000517514 TRIB1Q96RU8 372 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms