RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 GDE1Q9NZC3 331 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 PASKQ96RG2 1323 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 BAZ2AQ9UIF9 1905 aaKnown RBP-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 PTPRQQ9UMZ3 2332 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 WDR62O43379 1518 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 A0A0J9YVX5 310 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 RAMP1O60894 148 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 MFN2O95140 757 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 IGHMP01871 453 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 MYBL1P10243 752 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 PSMB5P28074 263 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 FOXA1P55317 472 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 SRP54P61011 504 aaKnown RBP-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 CCDC173Q0VFZ6 552 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 CRYMQ14894 314 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 GET4Q7L5D6 327 aaPredicted RBP-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 RABEPKQ7Z6M1 372 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 NRMQ8IXM6 262 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 STPG2Q8N412 459 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 MCUQ8NE86 351 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 OR51F2Q8NH61 342 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 DLX4Q92988 240 aaPredicted RBP-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 AP2M1Q96CW1 435 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 VMP1Q96GC9 406 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 TGM7Q96PF1 710 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 S1PR3Q99500 378 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 FAM103A1Q9BTL3 118 aaKnown RBP-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 APOOQ9BUR5 198 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 ZNF302Q9NR11 478 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 DDX19AQ9NUU7 478 aaKnown RBP-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 ADD3Q9UEY8 706 aaKnown RBP-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 PTRH2Q9Y3E5 179 aaKnown RBP-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 AP4B1Q9Y6B7 739 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 KIF7Q2M1P5 1343 aa-2.26□□□□□ -2.77
RNU6-539P-201ENST00000516665 IGHV3-74A0A0B4J1X5 117 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 ANKRD62A6NC57 917 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 SDR42E2A6NKP2 422 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 CTDSP2O14595 271 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 SH2D1BO14796 132 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 LUC7L3O95232 432 aaKnown RBP-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 DDX58O95786 925 aaKnown RBP-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 LGI1O95970 557 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 IGSF6O95976 241 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 CYB5R3P00387 301 aaPredicted RBP-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 IGLV3-25P01717 112 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 GYG1P46976 350 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 GMPSP49915 693 aaPredicted RBP-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 FGF8P55075 233 aaPredicted RBP-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 HSPA14Q0VDF9 509 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 BNIP1Q12981 228 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 NDUFA9Q16795 377 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 PVRIGQ6DKI7 326 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 C1orf228Q6PIY5 440 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 STAC2Q6ZMT1 411 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 BPIFB2Q8N4F0 458 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 OR10G3Q8NGC4 313 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 OR4C13Q8NGP0 309 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 SPATA18Q8TC71 538 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 TRUB1Q8WWH5 349 aaKnown RBP-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 SLC5A11Q8WWX8 675 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 DNAJC30Q96LL9 226 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 LRRC3BQ96PB8 259 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 CACNG6Q9BXT2 260 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 C20orf85Q9H1P6 137 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 SRMSQ9H3Y6 488 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 C1orf198Q9H425 327 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 SIAEQ9HAT2 523 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 GIMAP4Q9NUV9 329 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 C21orf62Q9NYP8 219 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 SUCLA2Q9P2R7 463 aaPredicted RBP-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 DDX25Q9UHL0 483 aaKnown RBP-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 PURGQ9UJV8 347 aaKnown RBP-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 SSH2Q76I76 1423 aa-2.27□□□□□ -2.77
RNU6-539P-201ENST00000516665 TSPOAP1O95153 1857 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 CCDC196A0A1B0GTZ2 297 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 LRIT2A6NDA9 550 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 M0R296 226 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 AGPAT2O15120 278 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 SLC31A2O15432 143 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 FLRT2O43155 660 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 GABARAPO95166 117 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 IGHV3-43DP0DP04 118 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 ETS2P15036 469 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 ATP6V1B2P21281 511 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 SPRR2DP22532 72 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 ME2P23368 584 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 CNTFRP26992 372 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 GCAP28676 217 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 CCR7P32248 378 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 OR1G1P47890 313 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 CYB561P49447 251 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 CCR9P51686 369 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 NCBP2P52298 156 aaKnown RBP eCLIP-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 RUNX1Q01196 453 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 TSPY1Q01534 308 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 CASP8Q14790 479 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 ADPRMQ3LIE5 342 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 SP6Q3SY56 376 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 TIGITQ495A1 244 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 TEX30Q5JUR7 227 aa-2.28□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms