RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 IL4RP24394 825 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 HNRNPH3P31942 346 aaKnown RBP3.44□□□□□ -1.86
HTT-210ENST00000512909 SLC1A1P43005 524 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 ATP4BP51164 291 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 CCL7P80098 99 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 SLC25A11Q02978 314 aaKnown RBP3.44□□□□□ -1.86
HTT-210ENST00000512909 MFGE8Q08431 387 aaPredicted RBP3.44□□□□□ -1.86
HTT-210ENST00000512909 TFDP2Q14188 446 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 PRPSAP1Q14558 356 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 EXOSC7Q15024 291 aaKnown RBP3.44□□□□□ -1.86
HTT-210ENST00000512909 PAFAH1B3Q15102 231 aaKnown RBP3.44□□□□□ -1.86
HTT-210ENST00000512909 PDK1Q15118 436 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 SLC1A5Q15758 541 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 DPYSL2Q16555 572 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 TMEM44Q2T9K0 475 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 HFEQ30201 348 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 HIGD2BQ4VC39 106 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 TOR1AIP1Q5JTV8 583 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 TCHHL1Q5QJ38 904 aaPredicted RBP3.44□□□□□ -1.86
HTT-210ENST00000512909 TPRG1LQ5T0D9 272 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 NCBP2-AS2Q69YL0 99 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 STEAP1BQ6NZ63 245 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 GUSBP11Q6P575 273 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 EMBQ6PCB8 327 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 CNSTQ6PJW8 725 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 MFSD7Q6UXD7 560 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 APOOLQ6UXV4 268 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 DLEU7Q6UYE1 221 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 RFLNAQ6ZTI6 216 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 HSD11B1LQ7Z5J1 315 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 NT5DC3Q86UY8 548 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 ZSCAN30Q86W11 494 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 LRRC49Q8IUZ0 686 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 ABHD12Q8N2K0 398 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 CENPSQ8N2Z9 138 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 KDM8Q8N371 416 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 OR4C6Q8NH72 309 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 TFB1MQ8WVM0 346 aaKnown RBP3.44□□□□□ -1.86
HTT-210ENST00000512909 SLC13A3Q8WWT9 602 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 SPATA13Q96N96 652 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 ALS2CR12Q96Q35 445 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 PSKH2Q96QS6 385 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 KLF6Q99612 283 aaPredicted RBP3.44□□□□□ -1.86
HTT-210ENST00000512909 DCTN5Q9BTE1 182 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 RIOK2Q9BVS4 552 aaKnown RBP3.44□□□□□ -1.86
HTT-210ENST00000512909 ATG10Q9H0Y0 220 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 GOLPH3Q9H4A6 298 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 PDFQ9HBH1 243 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 TECRQ9NZ01 308 aaKnown RBP3.44□□□□□ -1.86
HTT-210ENST00000512909 CTSZQ9UBR2 303 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 ASIC3Q9UHC3 531 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 BCAP29Q9UHQ4 241 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 FBXO7Q9Y3I1 522 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 FKBP7Q9Y680 259 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 PTPRDP23468 1912 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 HELZP42694 1942 aaKnown RBP3.44□□□□□ -1.86
HTT-210ENST00000512909 DENND4CQ5VZ89 1909 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 ZNF318Q5VUA4 2279 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 IGHV3OR16-10A0A075B7F0 116 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 A0A0J9YVX5 310 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 CXorf51AA0A1B0GTR3 108 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 SH2D1BO14796 132 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 SH3BGRLO75368 114 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 TBX6O95947 436 aaPredicted RBP3.43□□□□□ -1.86
HTT-210ENST00000512909 HPP00738 406 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 AGTP01019 485 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 ALPPP05187 535 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 HLA-DQB2P05538 268 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 FCER2P06734 321 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 ACADSP16219 412 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 AHCYP23526 432 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 ACP1P24666 158 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 AK4P27144 223 aaPredicted RBP3.43□□□□□ -1.86
HTT-210ENST00000512909 MAPK3P27361 379 aaPredicted RBP3.43□□□□□ -1.86
HTT-210ENST00000512909 ACTR1BP42025 376 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 ACADVLP49748 655 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 ADARP55265 1226 aaKnown RBP3.43□□□□□ -1.86
HTT-210ENST00000512909 RWDD2BP57060 319 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 EIF3EP60228 445 aaKnown RBP3.43□□□□□ -1.86
HTT-210ENST00000512909 PFN3P60673 137 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 GMFBP60983 142 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 ACTR1AP61163 376 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 MYBPC1Q00872 1141 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 ILKQ13418 452 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 SNX1Q13596 522 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 PEX6Q13608 980 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 FCN2Q15485 313 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 HAGHQ16775 308 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 KRTAP27-1Q3LI81 207 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 IL23RQ5VWK5 629 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 LRRC66Q68CR7 880 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 TAS2R42Q7RTR8 314 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 PEX26Q7Z412 305 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 NUFIP2Q7Z417 695 aaKnown RBP3.43□□□□□ -1.86
HTT-210ENST00000512909 SLC22A18ASQ8N1D0 253 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 ARL14Q8N4G2 192 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 LRRC17Q8N6Y2 441 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 PQLC3Q8N755 202 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 UBL4BQ8N7F7 174 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 DENND6BQ8NEG7 585 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms