RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-209	ENST00000512130	YTHDF1	Q9BYJ9	559 aa	Known RBP	4.09	□□□□□ -1.75
LINC01088-209	ENST00000512130	STAP1	Q9ULZ2	295 aa		4.09	□□□□□ -1.75
LINC01088-209	ENST00000512130	ASF1A	Q9Y294	204 aa		4.09	□□□□□ -1.75
LINC01088-209	ENST00000512130	ATP10A	O60312	1499 aa		4.09	□□□□□ -1.75
LINC01088-209	ENST00000512130	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.09	□□□□□ -1.76
LINC01088-209	ENST00000512130	IGHV3OR16-13	A0A075B7E8	117 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130		A0A0G2JRQ6	117 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	CCDC182	A6NF36	153 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	HAS3	O00219	553 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	AGRN	O00468	2067 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	MBTPS2	O43462	519 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	TOM1	O60784	492 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	CIB2	O75838	187 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	MMP23A	O75900	390 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130		P04436	131 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	CD1C	P29017	333 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	TAGLN2	P37802	199 aa	Known RBP	4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	CDK16	Q00536	496 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	TLE4	Q04727	773 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	MRPL28	Q13084	256 aa	Known RBP	4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	PLD1	Q13393	1074 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	OR5I1	Q13606	314 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	CARD16	Q5EG05	197 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	MARCH8	Q5T0T0	291 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	PRAMEF5	Q5TYX0	476 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	PRAMEF6	Q5VXH4	476 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	ENPP6	Q6UWR7	440 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130		Q6ZN92	141 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	C11orf42	Q8N5U0	333 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	FNDC5	Q8NAU1	212 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	BRSK1	Q8TDC3	778 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	SETD7	Q8WTS6	366 aa	Known RBP	4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	NUS1	Q96E22	293 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	NMRAL1	Q9HBL8	299 aa		4.08	□□□□□ -1.76
LINC01088-209	ENST00000512130	FAM47DP	A6NHR8	397 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	HCRTR1	O43613	425 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	NDUFB10	O96000	172 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	DDOST	P39656	456 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	GLP1R	P43220	463 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	KIR2DS4	P43632	304 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	KPNA2	P52292	529 aa	Known RBP	4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	SCRN3	Q0VDG4	424 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	GPRC6A	Q5T6X5	926 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	PLA2G4D	Q86XP0	818 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	ECHDC2	Q86YB7	292 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	CEND1	Q8N111	149 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	OR9K2	Q8NGE7	335 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	OR51S1	Q8NGJ8	323 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	AKR7L	Q8NHP1	331 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	MRPL45	Q9BRJ2	306 aa	Known RBP	4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	NAT9	Q9BTE0	207 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	CHRDL1	Q9BU40	450 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	METTL7A	Q9H8H3	244 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	PRR34	Q9NV39	138 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	ETNK2	Q9NVF9	386 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	AIG1	Q9NVV5	245 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	KCNIP1	Q9NZI2	227 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	ZNF639	Q9UID6	485 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	IKZF2	Q9UKS7	526 aa		4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	NAP1L2	Q9ULW6	460 aa	Predicted RBP	4.07	□□□□□ -1.76
LINC01088-209	ENST00000512130	PPIAL4E	A0A075B759	164 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	XKRY2	A2RUG3	117 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130		A6NIZ1	184 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	OR5B21	A6NL26	309 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	FOXE1	O00358	373 aa	Predicted RBP	4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	ABCD4	O14678	606 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	HSD17B6	O14756	317 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	WBP4	O75554	376 aa	Known RBP	4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	TIMP1	P01033	207 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	PPIAL4F	P0DN26	164 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	MCF2	P10911	925 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	CMA1	P23946	247 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	COX7A1	P24310	79 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	OPRD1	P41143	372 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	KLK7	P49862	253 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	RAP1B	P61224	184 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	GNMT	Q14749	295 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	BCL7A	Q4VC05	210 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	TMIGD1	Q6UXZ0	262 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	LRRC31	Q6UY01	552 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	LRRC74B	Q6ZQY2	392 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	SLC26A11	Q86WA9	606 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	EGFL6	Q8IUX8	553 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	SLC22A9	Q8IVM8	553 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	CDH26	Q8IXH8	852 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	RDH10	Q8IZV5	341 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	FBXL16	Q8N461	479 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	ACOT4	Q8N9L9	421 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	ZNF740	Q8NDX6	193 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	OR10G3	Q8NGC4	313 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	ZNF564	Q8TBZ8	553 aa	Predicted RBP	4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	STMN2	Q93045	179 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	P2RY13	Q9BPV8	354 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	ACTR6	Q9GZN1	396 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	PPA2	Q9H2U2	334 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	NIPAL2	Q9H841	368 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	SLC25A22	Q9H936	323 aa		4.06	□□□□□ -1.76
LINC01088-209	ENST00000512130	HOXC10	Q9NYD6	342 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms