RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 CTSFQ9UBX1 484 aa8.43□□□□□ -1.06
HTT-205ENST00000509043 NPFFR2Q9Y5X5 522 aa8.43□□□□□ -1.06
HTT-205ENST00000509043 TNRC6BQ9UPQ9 1833 aaKnown RBP8.43□□□□□ -1.06
HTT-205ENST00000509043 ADAMTS20P59510 1910 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 ANKRD61A6NGH8 418 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 A8MVM7 634 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 GABRPO00591 440 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 PHYHO14832 338 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 CASKO14936 926 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 RGS5O15539 181 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 GPRIN2O60269 458 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 CPNE3O75131 537 aaKnown RBP8.42□□□□□ -1.06
HTT-205ENST00000509043 GATBO75879 557 aaKnown RBP8.42□□□□□ -1.06
HTT-205ENST00000509043 CFIP05156 583 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 GP1BAP07359 652 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 ZNF883P0CG24 379 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 SPI1P17947 270 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 PTNP21246 168 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 BCAP31P51572 246 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 GBX2P52951 348 aaPredicted RBP8.42□□□□□ -1.06
HTT-205ENST00000509043 EMP2P54851 167 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 DAB2P98082 770 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 C17orf67Q0P5P2 114 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 HNRNPA0Q13151 305 aaKnown RBP8.42□□□□□ -1.06
HTT-205ENST00000509043 CDONQ4KMG0 1287 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 PRAMEF17Q5VTA0 474 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 ZNF385CQ66K41 422 aaPredicted RBP8.42□□□□□ -1.06
HTT-205ENST00000509043 SLC6A19Q695T7 634 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 PWWP2BQ6NUJ5 590 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 XKRXQ6PP77 449 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 CBLN3Q6UW01 205 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 TMEM205Q6UW68 189 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 TRILQ7L0X0 811 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 BTLAQ7Z6A9 289 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 MARCH9Q86YJ5 346 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 SLC35F2Q8IXU6 374 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 C10orf53Q8N6V4 93 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 GDPD1Q8N9F7 314 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 LRRC75AQ8NAA5 344 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 GATSQ8NAP1 163 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 NPEPL1Q8NDH3 523 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 OR2T4Q8NH00 348 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 OR4K13Q8NH42 304 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 MAFAQ8NHW3 353 aaPredicted RBP8.42□□□□□ -1.06
HTT-205ENST00000509043 NEIL3Q8TAT5 605 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 IFI44Q8TCB0 444 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 RNF138Q8WVD3 245 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 ABTB1Q969K4 478 aaPredicted RBP8.42□□□□□ -1.06
HTT-205ENST00000509043 TMEM203Q969S6 136 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 TRMT61AQ96FX7 289 aaKnown RBP8.42□□□□□ -1.06
HTT-205ENST00000509043 TIMP4Q99727 224 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 TM9SF2Q99805 663 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 KCNS3Q9BQ31 491 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 MED20Q9H944 212 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 SDHAF3Q9NRP4 125 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 TOR4AQ9NXH8 423 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 ATXN7L1Q9ULK2 861 aaPredicted RBP8.42□□□□□ -1.06
HTT-205ENST00000509043 PCDHGB2Q9Y5G2 931 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 ABCA7Q8IZY2 2146 aa8.42□□□□□ -1.06
HTT-205ENST00000509043 TNRC18O15417 2968 aaPredicted RBP8.42□□□□□ -1.06
HTT-205ENST00000509043 TRIOBPQ9H2D6 2365 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 hCG_2014768A0A024R1R8 64 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 A0A1W2PQL4 384 aaPredicted RBP8.41□□□□□ -1.06
HTT-205ENST00000509043 FUOMA2VDF0 154 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 ANKUB1A6NFN9 424 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 NPIPB13A6NJU9 1138 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 NPIPB4C9JG80 1138 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 ETV2O00321 342 aaPredicted RBP8.41□□□□□ -1.06
HTT-205ENST00000509043 NTN3O00634 580 aaPredicted RBP8.41□□□□□ -1.06
HTT-205ENST00000509043 CTDSP2O14595 271 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 GNB5O14775 395 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 OGG1O15527 345 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 OIP5O43482 229 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 SLC19A2O60779 497 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 NPIPB7O75200 414 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 ARL6IP5O75915 188 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 ZFAND5O76080 213 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 LALBAP00709 142 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 RENP00797 406 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 BGLAPP02818 100 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 TACSTD2P09758 323 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 MYL9P24844 172 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 FKBP2P26885 142 aaKnown RBP8.41□□□□□ -1.06
HTT-205ENST00000509043 MST1P26927 711 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 ITPKBP27987 946 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 APOBEC1P41238 236 aaKnown RBP8.41□□□□□ -1.06
HTT-205ENST00000509043 TGM4P49221 684 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 EFNA3P52797 238 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 CTXN1P60606 82 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 IFITM3Q01628 133 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 ZNF85Q03923 595 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 EGR4Q05215 589 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 SGCBQ16585 318 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 ZNF528Q3MIS6 628 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 FAM69AQ5T7M9 428 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 AGAP7PQ5VUJ5 663 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 DMKNQ6E0U4 476 aaPredicted RBP8.41□□□□□ -1.06
HTT-205ENST00000509043 FAAH2Q6GMR7 532 aa8.41□□□□□ -1.06
HTT-205ENST00000509043 RPL22L1Q6P5R6 122 aaKnown RBP8.41□□□□□ -1.06
HTT-205ENST00000509043 PAPD4Q6PIY7 484 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms