RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 PDK3Q15120 406 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 GUSBP1Q15486 140 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 RPS26P11Q5JNZ5 115 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 TMEM201Q5SNT2 666 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 NANOGP8Q6NSW7 305 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 HACD2Q6Y1H2 254 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 FCRLAQ7L513 359 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 OLIG3Q7RTU3 272 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 BTLAQ7Z6A9 289 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 STK32CQ86UX6 486 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 SNX32Q86XE0 403 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 VRK2Q86Y07 508 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 ARMC8Q8IUR7 673 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 STK35Q8TDR2 534 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 RNF128Q8TEB7 428 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 DNAJA4Q8WW22 397 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 MAL2Q969L2 176 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 ZC3HAV1LQ96H79 300 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 HOPXQ9BPY8 73 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 ELAC2Q9BQ52 826 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 ECSITQ9BQ95 431 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 SLC39A3Q9BRY0 314 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 POTEKPQ9BYX7 375 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 ADAM19Q9H013 955 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 OPN3Q9H1Y3 402 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 SLCO5A1Q9H2Y9 848 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 CXorf56Q9H5V9 222 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 PIF1Q9H611 641 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 TMEM185BQ9H7F4 350 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 COQ10BQ9H8M1 238 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 NANOGQ9H9S0 305 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 CTPS2Q9NRF8 586 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 SELENONQ9NZV5 590 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 CDC42EP3Q9UKI2 254 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 PROCRQ9UNN8 238 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 PCNX3Q9H6A9 2034 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 TMED7-TICAM2A0A0A6YYA0 188 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 CLDN24A6NM45 220 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 H0YC42 278 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 FXYD1O00168 92 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 SULT2B1O00204 365 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 ADAM11O75078 769 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 DCTN3O75935 186 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 PRKD3O94806 890 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 TP53P04637 393 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 TFPIP10646 304 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 PNMTP11086 282 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 DRD4P21917 467 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 CXCR1P25024 350 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 CADP27708 2225 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 TACR3P29371 465 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 ACAA2P42765 397 aaKnown RBP8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 KIR2DL2P43627 348 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 RNF144AP50876 292 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 TPD52P55327 224 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 SLC35A1P78382 337 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 PLAURQ03405 335 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 ADRM1Q16186 407 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 VMACQ2NL98 169 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 SWT1Q5T5J6 900 aaKnown RBP8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 FAM91A1Q658Y4 838 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 PPP4R4Q6NUP7 873 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 C6orf89Q6UWU4 347 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 CCDC80Q76M96 950 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 SSX8Q7RTT4 187 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 RANBP3LQ86VV4 465 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 PTOV1Q86YD1 416 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 LSMEM1Q8N8F7 131 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 CNEP1R1Q8N9A8 125 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 OR10A6Q8NH74 314 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 PIGXQ8TBF5 258 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 SLC26A7Q8TE54 656 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 OR5B2Q96R09 309 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 NPAS1Q99742 590 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 USB1Q9BQ65 265 aaKnown RBP8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 NAA11Q9BSU3 229 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 POLR2J2Q9GZM3 115 aaKnown RBP8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 POLR2J3Q9H1A7 115 aaKnown RBP8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 OR10A4Q9H209 315 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 IKZF5Q9H5V7 419 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 EFCAB1Q9HAE3 211 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 BCO1Q9HAY6 547 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 TMEM27Q9HBJ8 222 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 TMEM160Q9NX00 188 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 EMC3Q9P0I2 261 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 TMEM181Q9P2C4 612 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 KLHL13Q9P2N7 655 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 RPS6KB2Q9UBS0 482 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 OSGIN1Q9UJX0 560 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 TMED7Q9Y3B3 224 aa8.16□□□□□ -1.1
UBE2D3-223ENST00000508249 IGHV4-30-2A0A087WSY4 118 aa8.15□□□□□ -1.1
UBE2D3-223ENST00000508249 LOC100653049A0A140TA62 436 aa8.15□□□□□ -1.1
UBE2D3-223ENST00000508249 ZNF724A8MTY0 619 aa8.15□□□□□ -1.1
UBE2D3-223ENST00000508249 A8MVM7 634 aa8.15□□□□□ -1.1
UBE2D3-223ENST00000508249 FAM220BPB1ANY3 271 aa8.15□□□□□ -1.1
UBE2D3-223ENST00000508249 GPR171O14626 319 aa8.15□□□□□ -1.1
UBE2D3-223ENST00000508249 SPRY1O43609 319 aaPredicted RBP8.15□□□□□ -1.1
UBE2D3-223ENST00000508249 EFNA2O43921 213 aa8.15□□□□□ -1.1
UBE2D3-223ENST00000508249 CYTIPO60759 359 aa8.15□□□□□ -1.1
UBE2D3-223ENST00000508249 BCAS1O75363 584 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms