RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 ZNF610Q8N9Z0 462 aa6.48□□□□□ -1.37
GYPB-206ENST00000506516 PIGXQ8TBF5 258 aa6.48□□□□□ -1.37
GYPB-206ENST00000506516 RNF128Q8TEB7 428 aa6.48□□□□□ -1.37
GYPB-206ENST00000506516 SLC38A4Q969I6 547 aa6.48□□□□□ -1.37
GYPB-206ENST00000506516 C3orf49Q96BT1 292 aa6.48□□□□□ -1.37
GYPB-206ENST00000506516 TAMM41Q96BW9 452 aa6.48□□□□□ -1.37
GYPB-206ENST00000506516 NSL1Q96IY1 281 aa6.48□□□□□ -1.37
GYPB-206ENST00000506516 ARHGDIGQ99819 225 aa6.48□□□□□ -1.37
GYPB-206ENST00000506516 KCTD14Q9BQ13 255 aaPredicted RBP6.48□□□□□ -1.37
GYPB-206ENST00000506516 RSRP1Q9BUV0 290 aa6.48□□□□□ -1.37
GYPB-206ENST00000506516 OR11A1Q9GZK7 315 aa6.48□□□□□ -1.37
GYPB-206ENST00000506516 SPAG4Q9NPE6 437 aa6.48□□□□□ -1.37
GYPB-206ENST00000506516 ADPRHL2Q9NX46 363 aa6.48□□□□□ -1.37
GYPB-206ENST00000506516 KCNN3Q9UGI6 736 aa6.48□□□□□ -1.37
GYPB-206ENST00000506516 NDRG3Q9UGV2 375 aa6.48□□□□□ -1.37
GYPB-206ENST00000506516 SH3GLB1Q9Y371 365 aa6.48□□□□□ -1.37
GYPB-206ENST00000506516 MYO7BQ6PIF6 2116 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 UTP20O75691 2785 aaKnown RBP6.47□□□□□ -1.37
GYPB-206ENST00000506516 A0A087WUJ7 227 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 A0A1B0GWA3 101 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 TUBAL3A6NHL2 446 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 ZNF724A8MTY0 619 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 M0R3H8 397 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 CXCR6O00574 342 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 NME4O00746 187 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 GPR171O14626 319 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 SMAD9O15198 467 aaKnown RBP6.47□□□□□ -1.37
GYPB-206ENST00000506516 AHSA1O95433 338 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 CGAP01215 116 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 IMPDH2P12268 514 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 POU2F1P14859 743 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 CD247P20963 164 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 AGTR1P30556 359 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 SSTR2P30874 369 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 CPOXP36551 454 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 PCYT1AP49585 367 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 GSK3BP49841 420 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 CDH12P55289 794 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 SORDQ00796 357 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 BNIP2Q12982 314 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 GUSBP1Q15486 140 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 OR7A5Q15622 319 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 NRF1Q16656 503 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 CYBRD1Q53TN4 286 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 ENTPD8Q5MY95 495 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 C1orf140Q5VVS0 124 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 TMEM225Q6GV28 225 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 VWA1Q6PCB0 445 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 ZNF613Q6PF04 617 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 PAQR6Q6TCH4 344 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 C6orf89Q6UWU4 347 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 BEND4Q6ZU67 534 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 TUSC5Q8IXB3 177 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 PGAM4Q8N0Y7 254 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 GPR32P1Q8NGA4 272 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 OR6T1Q8NGN1 323 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 MFSD8Q8NHS3 518 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 VANGL1Q8TAA9 524 aaPredicted RBP6.47□□□□□ -1.37
GYPB-206ENST00000506516 ABHD3Q8WU67 409 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 FAM162AQ96A26 154 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 DNAJA3Q96EY1 480 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 TPD52L3Q96J77 140 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 EPYCQ99645 322 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 PSD2Q9BQI7 771 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 HDHD5Q9BXW7 423 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 RSPO3Q9BXY4 272 aaPredicted RBP6.47□□□□□ -1.37
GYPB-206ENST00000506516 POLR2J2Q9GZM3 115 aaKnown RBP6.47□□□□□ -1.37
GYPB-206ENST00000506516 POLR2J3Q9H1A7 115 aaKnown RBP6.47□□□□□ -1.37
GYPB-206ENST00000506516 OPN3Q9H1Y3 402 aaPredicted RBP6.47□□□□□ -1.37
GYPB-206ENST00000506516 BCO1Q9HAY6 547 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 ARL8BQ9NVJ2 186 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 PARPBPQ9NWS1 579 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 EMC3Q9P0I2 261 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 KLHL13Q9P2N7 655 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 ABCD2Q9UBJ2 740 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 USP22Q9UPT9 525 aa6.47□□□□□ -1.37
GYPB-206ENST00000506516 DNAJC13O75165 2243 aa6.46□□□□□ -1.37
GYPB-206ENST00000506516 USP9XQ93008 2570 aaPredicted RBP6.46□□□□□ -1.38
GYPB-206ENST00000506516 TRAV36DV7A0A075B6V5 113 aa6.46□□□□□ -1.38
GYPB-206ENST00000506516 A0A0B4J2E0 115 aa6.46□□□□□ -1.38
GYPB-206ENST00000506516 A0A1B0GX12 115 aa6.46□□□□□ -1.38
GYPB-206ENST00000506516 ZC3H12DA2A288 527 aaKnown RBP6.46□□□□□ -1.38
GYPB-206ENST00000506516 TRAPPC13A5PLN9 417 aa6.46□□□□□ -1.38
GYPB-206ENST00000506516 LIPT2A6NK58 231 aa6.46□□□□□ -1.38
GYPB-206ENST00000506516 CPSF4LA6NMK7 179 aaKnown RBP6.46□□□□□ -1.38
GYPB-206ENST00000506516 B2RBV5 119 aa6.46□□□□□ -1.38
GYPB-206ENST00000506516 C16orf97H3BN30 126 aa6.46□□□□□ -1.38
GYPB-206ENST00000506516 CASKO14936 926 aa6.46□□□□□ -1.38
GYPB-206ENST00000506516 CHP2O43745 196 aa6.46□□□□□ -1.38
GYPB-206ENST00000506516 TPST2O60704 377 aa6.46□□□□□ -1.38
GYPB-206ENST00000506516 NPIPB7O75200 414 aa6.46□□□□□ -1.38
GYPB-206ENST00000506516 MRPL33O75394 65 aaKnown RBP6.46□□□□□ -1.38
GYPB-206ENST00000506516 DEAF1O75398 565 aaPredicted RBP6.46□□□□□ -1.38
GYPB-206ENST00000506516 AKR7A3O95154 331 aa6.46□□□□□ -1.38
GYPB-206ENST00000506516 VAMP5O95183 116 aa6.46□□□□□ -1.38
GYPB-206ENST00000506516 ZNF682O95780 498 aa6.46□□□□□ -1.38
GYPB-206ENST00000506516 IGFBP2P18065 325 aa6.46□□□□□ -1.38
GYPB-206ENST00000506516 CALB2P22676 271 aa6.46□□□□□ -1.38
GYPB-206ENST00000506516 HTR2AP28223 471 aa6.46□□□□□ -1.38
GYPB-206ENST00000506516 CD79BP40259 229 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms