RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 LHX2P50458 406 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 PARP15Q460N3 678 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 DMRTC1Q5HYR2 192 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 SAMD4BQ5PRF9 694 aaKnown RBP2.58□□□□□ -2
TOPBP1-204ENST00000505804 Q6ZN92 141 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 ACP7Q6ZNF0 438 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 SLC26A11Q86WA9 606 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 OR6C4Q8NGE1 309 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 OR9G1Q8NH87 305 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 FANK1Q8TC84 345 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 SRSF12Q8WXF0 261 aaKnown RBP2.58□□□□□ -2
TOPBP1-204ENST00000505804 RLN3Q8WXF3 142 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 RSPH1Q8WYR4 309 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 EMG1Q92979 244 aaKnown RBP2.58□□□□□ -2
TOPBP1-204ENST00000505804 RNF2Q99496 336 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 SLC25A39Q9BZJ4 359 aaPredicted RBP2.58□□□□□ -2
TOPBP1-204ENST00000505804 ACTR6Q9GZN1 396 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 RBKSQ9H477 322 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 RNF167Q9H6Y7 350 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 UFSP2Q9NUQ7 469 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 THUMPD1Q9NXG2 353 aaKnown RBP2.58□□□□□ -2
TOPBP1-204ENST00000505804 PTBP2Q9UKA9 531 aaKnown RBP2.58□□□□□ -2
TOPBP1-204ENST00000505804 TP53TG5Q9Y2B4 290 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 NSG1A0A0A6YYJ2 146 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 AGPAT2O15120 278 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 MAGEB3O15480 346 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 POLR2DO15514 142 aaKnown RBP2.57□□□□□ -2
TOPBP1-204ENST00000505804 DIRAS1O95057 198 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 PRB2P02812 416 aaPredicted RBP2.57□□□□□ -2
TOPBP1-204ENST00000505804 MMP1P03956 469 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 KLK3P07288 261 aaPredicted RBP2.57□□□□□ -2
TOPBP1-204ENST00000505804 HSMCR30P0CW71 290 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 ICAM2P13598 275 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 GNA11P29992 359 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 BTCP35070 178 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 RPL13AP40429 203 aaKnown RBP2.57□□□□□ -2
TOPBP1-204ENST00000505804 GLP1RP43220 463 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 IFNAR2P48551 515 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 GSSP48637 474 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 CASP4P49662 377 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 GPM6AP51674 278 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 SH3BGRP55822 239 aaPredicted RBP2.57□□□□□ -2
TOPBP1-204ENST00000505804 DLX1P56177 255 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 EIF4EBP2Q13542 120 aaPredicted RBP2.57□□□□□ -2
TOPBP1-204ENST00000505804 VGLL4Q14135 290 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 OXA1LQ15070 435 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 DPYSL2Q16555 572 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 CCDC152Q4G0S7 254 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 C1orf220Q5T0J3 134 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 MARCH8Q5T0T0 291 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 OR52E8Q6IFG1 317 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 GALNT17Q6IS24 598 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 HSDL2Q6YN16 418 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 PGAP1Q75T13 922 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 OR52H1Q8NGJ2 320 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 BLOC1S5Q8TDH9 187 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 UBE2Q2Q8WVN8 375 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 NDRG1Q92597 394 aaKnown RBP2.57□□□□□ -2
TOPBP1-204ENST00000505804 UBE2E3Q969T4 207 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 OR2M2Q96R28 347 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 CHRDL1Q9BU40 450 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 ZSCAN5AQ9BUG6 496 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 OR11A1Q9GZK7 315 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 SMOXQ9NWM0 555 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 MRPS7Q9Y2R9 242 aaKnown RBP2.57□□□□□ -2
TOPBP1-204ENST00000505804 RPL36Q9Y3U8 105 aaKnown RBP2.57□□□□□ -2
TOPBP1-204ENST00000505804 PHF3Q92576 2039 aaKnown RBP2.57□□□□□ -2
TOPBP1-204ENST00000505804 SCN2AQ99250 2005 aa2.57□□□□□ -2
TOPBP1-204ENST00000505804 RPAP1Q9BWH6 1393 aaPredicted RBP2.57□□□□□ -2
TOPBP1-204ENST00000505804 MTCL1Q9Y4B5 1905 aaKnown RBP2.56□□□□□ -2
TOPBP1-204ENST00000505804 TCRBV9S1A1TA0A576 114 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 GMFGO60234 142 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 OXSR1O95747 527 aaPredicted RBP2.56□□□□□ -2
TOPBP1-204ENST00000505804 PCCAP05165 728 aaPredicted RBP2.56□□□□□ -2
TOPBP1-204ENST00000505804 ZNF44P15621 663 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 ZNF32P17041 273 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 FMO3P31513 532 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 QARSP47897 775 aaKnown RBP2.56□□□□□ -2
TOPBP1-204ENST00000505804 CSNK1DP48730 415 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 ARRB1P49407 418 aaPredicted RBP2.56□□□□□ -2
TOPBP1-204ENST00000505804 EFNB2P52799 333 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 KLRB1Q12918 225 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 ATP6AP1Q15904 470 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 DUSP7Q16829 419 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 MICBQ29980 383 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 KRTAP13-3Q3SY46 172 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 BOLA3Q53S33 107 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 CARD16Q5EG05 197 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 CFAP157Q5JU67 520 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 OR4F3Q6IEY1 312 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 ZNF620Q6ZNG0 422 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 ZNF429Q86V71 674 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 PAQR7Q86WK9 346 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 MDS2Q8NDY4 140 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 RNF185Q96GF1 192 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 TIMD4Q96H15 378 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 FCRL1Q96LA6 429 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 OXGR1Q96P68 337 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 ROGDIQ9GZN7 287 aa2.56□□□□□ -2
TOPBP1-204ENST00000505804 SEC14L3Q9UDX4 400 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms