RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 CXCR1P25024 350 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 DPP4P27487 766 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 POU1F1P28069 291 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 FMO3P31513 532 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 GRK5P34947 590 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 PLA2G5P39877 138 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 RPS5P46782 204 aaKnown RBP9.36□□□□□ -0.91
TPM3-217ENST00000504663 TNFSF10P50591 281 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 CCL11P51671 97 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 ZNF41P51814 821 aaPredicted RBP9.36□□□□□ -0.91
TPM3-217ENST00000504663 OC90Q02509 493 aaPredicted RBP9.36□□□□□ -0.91
TPM3-217ENST00000504663 TLE3Q04726 772 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 HYAL4Q2M3T9 481 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 SLC25A30Q5SVS4 291 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 KRT80Q6KB66 452 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 RRM2BQ7LG56 351 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 FAM122BQ7Z309 247 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 BCDIN3DQ7Z5W3 292 aaKnown RBP9.36□□□□□ -0.91
TPM3-217ENST00000504663 WDFY1Q8IWB7 410 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 SULF2Q8IWU5 870 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 SETD9Q8NE22 299 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 OR51A7Q8NH64 312 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 TEX47Q8TBZ9 253 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 DNAJA3Q96EY1 480 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 ADGRG7Q96K78 797 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 DMRTB1Q96MA1 342 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 DDOQ99489 341 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 SMAD5Q99717 465 aaKnown RBP9.36□□□□□ -0.91
TPM3-217ENST00000504663 APOL4Q9BPW4 351 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 FKRPQ9H9S5 495 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 ZFP64Q9NPA5 681 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 KRCC1Q9NPI7 259 aaPredicted RBP9.36□□□□□ -0.91
TPM3-217ENST00000504663 ABI3Q9P2A4 366 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 MRPS18CQ9Y3D5 142 aaKnown RBP9.36□□□□□ -0.91
TPM3-217ENST00000504663 ZNF337Q9Y3M9 751 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 CACNA1GO43497 2377 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 CNTRLQ7Z7A1 2325 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 PTPRQQ9UMZ3 2332 aa9.36□□□□□ -0.91
TPM3-217ENST00000504663 LIPT2A6NK58 231 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 KDM4EB2RXH2 506 aaPredicted RBP9.35□□□□□ -0.91
TPM3-217ENST00000504663 ZNF814B7Z6K7 855 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 XPNPEP2O43895 674 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 CBR3O75828 277 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 TNFAIP8O95379 198 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 PPP1R3DO95685 299 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 HPNP05981 417 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 CELA3AP09093 270 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 SAGP10523 405 aaPredicted RBP9.35□□□□□ -0.91
TPM3-217ENST00000504663 TCEA1P23193 301 aaKnown RBP9.35□□□□□ -0.91
TPM3-217ENST00000504663 GRPRP30550 384 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 CASRP41180 1078 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 AQP2P41181 271 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 SLC15A1P46059 708 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 MASP1P48740 699 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 PCYT1AP49585 367 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 MLLT10P55197 1068 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 CDH15P55291 814 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 GFRA1P56159 465 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 CLDN15P56746 228 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 CXCR4P61073 352 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 SLC35A2P78381 396 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 IL5RAQ01344 420 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 RPL18Q07020 188 aaKnown RBP9.35□□□□□ -0.91
TPM3-217ENST00000504663 DBPQ10586 325 aaPredicted RBP9.35□□□□□ -0.91
TPM3-217ENST00000504663 ACACAQ13085 2346 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 SELENBP1Q13228 472 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 BLMHQ13867 455 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 DOC2BQ14184 412 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 ZNF239Q16600 458 aaKnown RBP9.35□□□□□ -0.91
TPM3-217ENST00000504663 GLYR1Q49A26 553 aaPredicted RBP9.35□□□□□ -0.91
TPM3-217ENST00000504663 SYT14P1Q58G82 188 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 RNFT1Q5M7Z0 435 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 FAM69AQ5T7M9 428 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 AADACL4Q5VUY2 407 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 SLC25A25Q6KCM7 469 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 RPL13AP3Q6NVV1 102 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 SLC27A4Q6P1M0 643 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 BRICD5Q6PL45 260 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 C5orf46Q6UWT4 87 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 GALNTL5Q7Z4T8 443 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 OAFQ86UD1 273 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 GGNQ86UU5 652 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 IGFN1Q86VF2 1251 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 SLC43A2Q8N370 569 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 ZNF786Q8N393 782 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 FAM26EQ8N5C1 309 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 TCEANCQ8N8B7 351 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 ZFP62Q8NB50 900 aaPredicted RBP9.35□□□□□ -0.91
TPM3-217ENST00000504663 FAM83FQ8NEG4 500 aaPredicted RBP9.35□□□□□ -0.91
TPM3-217ENST00000504663 OR2T33Q8NG76 320 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 TMEM163Q8TC26 289 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 OSTF1Q92882 214 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 FAM173AQ9BQD7 235 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 HCAR1Q9BXC0 346 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 POTEKPQ9BYX7 375 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 TTTY12Q9BZ98 90 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 DUSP21Q9H596 190 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 FANCFQ9NPI8 374 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 NRIP3Q9NQ35 241 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 HINT3Q9NQE9 182 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms