RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 PQLC1Q8N2U9 271 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 EXD3Q8N9H8 876 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC44A5Q8NCS7 719 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 OR6K3Q8NGY3 331 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 GPR151Q8TDV0 419 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 DCAKDQ8WVC6 231 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 KCNJ9Q92806 393 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 GHSRQ92847 366 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 SMARCD2Q92925 531 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 ESAMQ96AP7 390 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 LENG9Q96B70 501 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 CREB3L1Q96BA8 519 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 BPIFA2Q96DR5 249 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 HSFY1Q96LI6 401 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 OR8B4Q96RC9 309 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 DCLRE1CQ96SD1 692 aaKnown RBP2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 CMSS1Q9BQ75 279 aaKnown RBP2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 RTP3Q9BQQ7 232 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 ZDHHC6Q9H6R6 413 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 NANOGQ9H9S0 305 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 FKRPQ9H9S5 495 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 ROPN1Q9HAT0 212 aaPredicted RBP2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 APMAPQ9HDC9 416 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 MYOZ2Q9NPC6 264 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 MIEF1Q9NQG6 463 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 AGPAT4Q9NRZ5 378 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 OLAHQ9NV23 265 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 UBQLN2Q9UHD9 624 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC6A5Q9Y345 797 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 COLEC10Q9Y6Z7 277 aa2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 POLR1AO95602 1720 aaPredicted RBP2.84□□□□□ -1.95
SNRNP48-202ENST00000496946 MAGI2Q86UL8 1455 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 A0A1W2PQF6 199 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 RPS10-NUDT3A0A1W2PQS6 291 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 C20orf202A1L168 122 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 TMEM213A2RRL7 107 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 A8MXK9 166 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 C9JVG2 144 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 M0R036 132 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 SSNA1O43805 119 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 FADS2O95864 444 aaKnown RBP2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 ELANEP08246 267 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC35G4P0C7Q5 338 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 GOT1P17174 413 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 ELAVL4P26378 380 aaKnown RBP2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 CD82P27701 267 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 CHI3L1P36222 383 aaPredicted RBP2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 RPS9P46781 194 aaKnown RBP2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 CSNK1A1P48729 337 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 WNT3P56703 355 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 HHEXQ03014 270 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF844Q08AG5 666 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF155Q12901 538 aaPredicted RBP2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 SRSF6Q13247 344 aaKnown RBP2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 GAB1Q13480 694 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 GTF2H2Q13888 395 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 PRPSAP1Q14558 356 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 PTGES3Q15185 160 aaKnown RBP2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 INPP5JQ15735 1006 aaPredicted RBP2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 RBBP7Q16576 425 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 GUCA2BQ16661 112 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 CYP51A1Q16850 503 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 TATDN3Q17R31 274 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 COL28A1Q2UY09 1125 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 NCMAPQ5T1S8 102 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 SAMD13Q5VXD3 122 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 TAPT1Q6NXT6 567 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 GTF2H2CQ6P1K8 395 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 TEX261Q6UWH6 196 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 C17orf99Q6UX52 265 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 TMEM182Q6ZP80 229 aaPredicted RBP2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 Q6ZPB1 254 aaPredicted RBP2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 RASSF6Q6ZTQ3 369 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 MOB2Q70IA6 237 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 GRASPQ7Z6J2 395 aaPredicted RBP2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 SERPINA9Q86WD7 417 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 TMEM126BQ8IUX1 230 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 C8orf59Q8N0T1 100 aaPredicted RBP2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 DHRSXQ8N5I4 330 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 TEX26Q8N6G2 289 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 FBXO36Q8NEA4 188 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM71CQ8NEG0 241 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 MAPK15Q8TD08 544 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 NPRL2Q8WTW4 380 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 C1orf54Q8WWF1 131 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 TFAP2BQ92481 460 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 NXNL1Q96CM4 212 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 MARK4Q96L34 752 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF354BQ96LW1 612 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 OR52B2Q96RD2 323 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 CD180Q99467 661 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 MSTO1Q9BUK6 570 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 FICDQ9BVA6 458 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 CADM1Q9BY67 442 aaKnown RBP2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 WWTR1Q9GZV5 400 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 CXorf21Q9HAI6 301 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 CACYBPQ9HB71 228 aaKnown RBP2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 SGK2Q9HBY8 427 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 ANKHQ9HCJ1 492 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 LHX9Q9NQ69 397 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms