RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 ZNF35P13682 527 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 HPGDP15428 266 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 LMO1P25800 156 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 GLRXP35754 106 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 MAGEA8P43361 318 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 P2RX1P51575 399 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 PHEXP78562 749 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 CDK16Q00536 496 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 EGFEM1PQ0D2K5 195 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 FXNQ16595 210 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 C3orf36Q3SXR2 165 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 SYT14P1Q58G82 188 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 TMEM255AQ5JRV8 349 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 GPR157Q5UAW9 335 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 GKAP1Q5VSY0 366 aaPredicted RBP7.37□□□□□ -1.23
GARNL3-219ENST00000495172 AAED1Q7RTV5 226 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 ZBED8Q8IZ13 594 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 C1orf52Q8N6N3 182 aaKnown RBP7.37□□□□□ -1.23
GARNL3-219ENST00000495172 WFDC9Q8NEX5 89 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 Q8NFD4 153 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 GEMIN6Q8WXD5 167 aaKnown RBP7.37□□□□□ -1.23
GARNL3-219ENST00000495172 LRRC39Q96DD0 335 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 ERP27Q96DN0 273 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 SERPINI1Q99574 410 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 PCGF1Q9BSM1 259 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 DERL2Q9GZP9 239 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 PPA2Q9H2U2 334 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 CENPHQ9H3R5 247 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 ALG9Q9H6U8 611 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 SAP30LQ9HAJ7 183 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 PATZ1Q9HBE1 687 aaKnown RBP7.37□□□□□ -1.23
GARNL3-219ENST00000495172 DECR2Q9NUI1 292 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 EXD2Q9NVH0 621 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 MRTO4Q9UKD2 239 aaKnown RBP7.37□□□□□ -1.23
GARNL3-219ENST00000495172 C19orf53Q9UNZ5 99 aaPredicted RBP7.37□□□□□ -1.23
GARNL3-219ENST00000495172 SLC12A4Q9UP95 1085 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 RCE1Q9Y256 329 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 NOX1Q9Y5S8 564 aa7.37□□□□□ -1.23
GARNL3-219ENST00000495172 NUP214P35658 2090 aaPredicted RBP7.36□□□□□ -1.23
GARNL3-219ENST00000495172 A0A096LPK6 155 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 IGHV2-70DA0A0C4DH43 119 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 A0A1B0GW55 424 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 A8MXK9 166 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 ZNF587BE7ETH6 402 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 TNFRSF13BO14836 293 aaPredicted RBP7.36□□□□□ -1.23
GARNL3-219ENST00000495172 SPRY3O43610 288 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 UBOX5O94941 541 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 ZNF205O95201 554 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 WISP3O95389 354 aaPredicted RBP7.36□□□□□ -1.23
GARNL3-219ENST00000495172 DUX4L2P0CJ85 424 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 DUX4L3P0CJ86 424 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 DUX4L5P0CJ88 424 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 DUX4L6P0CJ89 424 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 DUX4L7P0CJ90 424 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 MAGEA3P43357 314 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 NCBP2P52298 156 aaKnown RBP eCLIP7.36□□□□□ -1.23
GARNL3-219ENST00000495172 PSMD4P55036 377 aaKnown RBP7.36□□□□□ -1.23
GARNL3-219ENST00000495172 CSNK2A1P68400 391 aaPredicted RBP7.36□□□□□ -1.23
GARNL3-219ENST00000495172 PRB3Q04118 309 aaPredicted RBP7.36□□□□□ -1.23
GARNL3-219ENST00000495172 MERTKQ12866 999 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 SLC17A1Q14916 467 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 RASA2Q15283 850 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 SLC25A53Q5H9E4 307 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 DUX4L9Q6RFH8 374 aaPredicted RBP7.36□□□□□ -1.23
GARNL3-219ENST00000495172 LRIG3Q6UXM1 1119 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 GDPGP1Q6ZNW5 385 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 PEX26Q7Z412 305 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 L3MBTL4Q8NA19 623 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 DACT3Q96B18 629 aaPredicted RBP7.36□□□□□ -1.23
GARNL3-219ENST00000495172 CERS2Q96G23 380 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 BOD1Q96IK1 185 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 GPR78Q96P69 363 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 BBS4Q96RK4 519 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 CHID1Q9BWS9 393 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 NMUR2Q9GZQ4 415 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 SLC35C2Q9NQQ7 365 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 DDX18Q9NVP1 670 aaKnown RBP7.36□□□□□ -1.23
GARNL3-219ENST00000495172 DUX4Q9UBX2 424 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 SLC9A8Q9Y2E8 581 aa7.36□□□□□ -1.23
GARNL3-219ENST00000495172 CENPVL1A0A0U1RR11 272 aa7.35□□□□□ -1.23
GARNL3-219ENST00000495172 CENPVL3A0A0U1RRI6 287 aa7.35□□□□□ -1.23
GARNL3-219ENST00000495172 AKR1B15C9JRZ8 316 aaPredicted RBP7.35□□□□□ -1.23
GARNL3-219ENST00000495172 F5H0A9 414 aaPredicted RBP7.35□□□□□ -1.23
GARNL3-219ENST00000495172 FBXO24O75426 580 aa7.35□□□□□ -1.23
GARNL3-219ENST00000495172 CYP7B1O75881 506 aa7.35□□□□□ -1.23
GARNL3-219ENST00000495172 SASH3O75995 380 aa7.35□□□□□ -1.23
GARNL3-219ENST00000495172 S100BP04271 92 aaPredicted RBP7.35□□□□□ -1.23
GARNL3-219ENST00000495172 NGFRP08138 427 aa7.35□□□□□ -1.23
GARNL3-219ENST00000495172 CHN1P15882 459 aa7.35□□□□□ -1.23
GARNL3-219ENST00000495172 PGAM1P18669 254 aa7.35□□□□□ -1.23
GARNL3-219ENST00000495172 PRKAG1P54619 331 aa7.35□□□□□ -1.23
GARNL3-219ENST00000495172 SESN3P58005 492 aa7.35□□□□□ -1.23
GARNL3-219ENST00000495172 ROR2Q01974 943 aaKnown RBP7.35□□□□□ -1.23
GARNL3-219ENST00000495172 ZNF763Q0D2J5 394 aa7.35□□□□□ -1.23
GARNL3-219ENST00000495172 HABP2Q14520 560 aaPredicted RBP7.35□□□□□ -1.23
GARNL3-219ENST00000495172 ZMYND11Q15326 602 aa7.35□□□□□ -1.23
GARNL3-219ENST00000495172 DUSP5Q16690 384 aa7.35□□□□□ -1.23
GARNL3-219ENST00000495172 TCTEX1D4Q5JR98 221 aa7.35□□□□□ -1.23
GARNL3-219ENST00000495172 LIPJQ5W064 366 aa7.35□□□□□ -1.23
GARNL3-219ENST00000495172 C6orf89Q6UWU4 347 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms