RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 HEATR1Q9H583 2144 aaKnown RBP20.32■□□□□ 0.84
COL27A1-208ENST00000494780 CDHR4A6H8M9 788 aa20.32■□□□□ 0.84
COL27A1-208ENST00000494780 AQP7P3A6NL99 342 aa20.32■□□□□ 0.84
COL27A1-208ENST00000494780 AKR7A3O95154 331 aa20.32■□□□□ 0.84
COL27A1-208ENST00000494780 FAM157CP0CG43 387 aa20.32■□□□□ 0.84
COL27A1-208ENST00000494780 OR7A5Q15622 319 aa20.32■□□□□ 0.84
COL27A1-208ENST00000494780 LIN52Q52LA3 116 aa20.32■□□□□ 0.84
COL27A1-208ENST00000494780 TNFAIP8L3Q5GJ75 292 aa20.32■□□□□ 0.84
COL27A1-208ENST00000494780 LSRQ86X29 649 aaPredicted RBP20.32■□□□□ 0.84
COL27A1-208ENST00000494780 C10orf105Q8TEF2 133 aa20.32■□□□□ 0.84
COL27A1-208ENST00000494780 PROX1Q92786 737 aa20.32■□□□□ 0.84
COL27A1-208ENST00000494780 ZNF385AQ96PM9 386 aaKnown RBP20.32■□□□□ 0.84
COL27A1-208ENST00000494780 MANSC1Q9H8J5 431 aa20.32■□□□□ 0.84
COL27A1-208ENST00000494780 OBP2BQ9NPH6 170 aa20.32■□□□□ 0.84
COL27A1-208ENST00000494780 RLIMQ9NVW2 624 aa20.32■□□□□ 0.84
COL27A1-208ENST00000494780 DSPPQ9NZW4 1301 aa20.31■□□□□ 0.84
COL27A1-208ENST00000494780 ATP6V1G2-DDX39BF2Z307 99 aa20.31■□□□□ 0.84
COL27A1-208ENST00000494780 ACAA2P42765 397 aaKnown RBP20.31■□□□□ 0.84
COL27A1-208ENST00000494780 MAPK11Q15759 364 aa20.31■□□□□ 0.84
COL27A1-208ENST00000494780 WBP2NLQ6ICG8 309 aa20.31■□□□□ 0.84
COL27A1-208ENST00000494780 OR52P1PQ8NH57 321 aa20.31■□□□□ 0.84
COL27A1-208ENST00000494780 TMEM158Q8WZ71 300 aa20.31■□□□□ 0.84
COL27A1-208ENST00000494780 TAPBPLQ9BX59 468 aa20.31■□□□□ 0.84
COL27A1-208ENST00000494780 CENPHQ9H3R5 247 aa20.31■□□□□ 0.84
COL27A1-208ENST00000494780 CALML5Q9NZT1 146 aa20.31■□□□□ 0.84
COL27A1-208ENST00000494780 P2RX2Q9UBL9 471 aa20.31■□□□□ 0.84
COL27A1-208ENST00000494780 A8MVM7 634 aa20.3■□□□□ 0.84
COL27A1-208ENST00000494780 RFXANKO14593 260 aa20.3■□□□□ 0.84
COL27A1-208ENST00000494780 VAMP5O95183 116 aa20.3■□□□□ 0.84
COL27A1-208ENST00000494780 GKN3PP0CG01 181 aa20.3■□□□□ 0.84
COL27A1-208ENST00000494780 PAX7P23759 505 aa20.3■□□□□ 0.84
COL27A1-208ENST00000494780 EPHA3P29320 983 aa20.3■□□□□ 0.84
COL27A1-208ENST00000494780 COPZ1P61923 177 aa20.3■□□□□ 0.84
COL27A1-208ENST00000494780 ZSWIM7Q19AV6 140 aa20.3■□□□□ 0.84
COL27A1-208ENST00000494780 CYB5R2Q6BCY4 276 aa20.3■□□□□ 0.84
COL27A1-208ENST00000494780 TMEM225Q6GV28 225 aa20.3■□□□□ 0.84
COL27A1-208ENST00000494780 ZNF836Q6ZNA1 936 aa20.3■□□□□ 0.84
COL27A1-208ENST00000494780 GPAT4Q86UL3 456 aa20.3■□□□□ 0.84
COL27A1-208ENST00000494780 VRK2Q86Y07 508 aa20.3■□□□□ 0.84
COL27A1-208ENST00000494780 PHC2Q8IXK0 858 aa20.3■□□□□ 0.84
COL27A1-208ENST00000494780 NANOS1Q8WY41 292 aaKnown RBP20.3■□□□□ 0.84
COL27A1-208ENST00000494780 AURKBQ96GD4 344 aaPredicted RBP20.3■□□□□ 0.84
COL27A1-208ENST00000494780 KCNK17Q96T54 332 aa20.3■□□□□ 0.84
COL27A1-208ENST00000494780 PAIP2Q9BPZ3 127 aaKnown RBP20.3■□□□□ 0.84
COL27A1-208ENST00000494780 TMEM45AQ9NWC5 275 aa20.3■□□□□ 0.84
COL27A1-208ENST00000494780 MOKQ9UQ07 419 aa20.3■□□□□ 0.84
COL27A1-208ENST00000494780 TRPC5OSA6NMA1 111 aa20.29■□□□□ 0.84
COL27A1-208ENST00000494780 HDAC3O15379 428 aa20.29■□□□□ 0.84
COL27A1-208ENST00000494780 KRT33AO76009 404 aa20.29■□□□□ 0.84
COL27A1-208ENST00000494780 F12P00748 615 aaPredicted RBP20.29■□□□□ 0.84
COL27A1-208ENST00000494780 IL6P05231 212 aa20.29■□□□□ 0.84
COL27A1-208ENST00000494780 CDH2P19022 906 aaPredicted RBP20.29■□□□□ 0.84
COL27A1-208ENST00000494780 USF1P22415 310 aaPredicted RBP20.29■□□□□ 0.84
COL27A1-208ENST00000494780 MVDP53602 400 aa20.29■□□□□ 0.84
COL27A1-208ENST00000494780 SWI5Q1ZZU3 235 aa20.29■□□□□ 0.84
COL27A1-208ENST00000494780 MST1LQ2TV78 715 aa20.29■□□□□ 0.84
COL27A1-208ENST00000494780 HIKESHIQ53FT3 197 aa20.29■□□□□ 0.84
COL27A1-208ENST00000494780 CADM2Q8N3J6 435 aa20.29■□□□□ 0.84
COL27A1-208ENST00000494780 WDR55Q9H6Y2 383 aaPredicted RBP20.29■□□□□ 0.84
COL27A1-208ENST00000494780 IDO1P14902 403 aa20.28■□□□□ 0.84
COL27A1-208ENST00000494780 P2RY4P51582 365 aa20.28■□□□□ 0.84
COL27A1-208ENST00000494780 CRISP3P54108 245 aa20.28■□□□□ 0.84
COL27A1-208ENST00000494780 BNIP2Q12982 314 aa20.28■□□□□ 0.84
COL27A1-208ENST00000494780 PDCD4Q53EL6 469 aaKnown RBP20.28■□□□□ 0.84
COL27A1-208ENST00000494780 CEP85LQ5SZL2 805 aa20.28■□□□□ 0.84
COL27A1-208ENST00000494780 RNF220Q5VTB9 566 aa20.28■□□□□ 0.84
COL27A1-208ENST00000494780 HHATQ5VTY9 493 aa20.28■□□□□ 0.84
COL27A1-208ENST00000494780 OR1K1Q8NGR3 316 aa20.28■□□□□ 0.84
COL27A1-208ENST00000494780 FBXO17Q96EF6 278 aa20.28■□□□□ 0.84
COL27A1-208ENST00000494780 BEX2Q9BXY8 128 aa20.28■□□□□ 0.84
COL27A1-208ENST00000494780 SLC6A13Q9NSD5 602 aa20.28■□□□□ 0.84
COL27A1-208ENST00000494780 THAP1Q9NVV9 213 aa20.28■□□□□ 0.84
COL27A1-208ENST00000494780 ADPRHL2Q9NX46 363 aa20.28■□□□□ 0.84
COL27A1-208ENST00000494780 LPAR3Q9UBY5 353 aa20.28■□□□□ 0.84
COL27A1-208ENST00000494780 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.28■□□□□ 0.845e-14■□□□□ 10.7
COL27A1-208ENST00000494780 ZNF443Q9Y2A4 671 aaPredicted RBP20.28■□□□□ 0.84
COL27A1-208ENST00000494780 V9GYY5 206 aaPredicted RBP20.28■□□□□ 0.84
COL27A1-208ENST00000494780 YLPM1P49750 1951 aaKnown RBP20.28■□□□□ 0.84
COL27A1-208ENST00000494780 A0A096LPI6 279 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 OR6C65A6NJZ3 312 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 ZNF587BE7ETH6 402 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 KLF11O14901 512 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 FRS3O43559 492 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 SLC22A3O75751 556 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 BCHEP06276 602 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 TFPTP0C1Z6 253 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 ZCCHC18P0CG32 403 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 IGHV4-31P0DP07 118 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 ETFAP13804 333 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 CRATP43155 626 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 LSM11P83369 360 aaKnown RBP eCLIP20.27■□□□□ 0.842e-13■■■□□ 18.4
COL27A1-208ENST00000494780 LARS2Q15031 903 aaKnown RBP20.27■□□□□ 0.84
COL27A1-208ENST00000494780 TBRG1Q3YBR2 411 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 C1orf140Q5VVS0 124 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 CREB3L2Q70SY1 520 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 CROCCP2Q86T23 111 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 SLC38A5Q8WUX1 472 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 SLC38A2Q96QD8 506 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 ARMC7Q9H6L4 198 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 ZNF232Q9UNY5 417 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms