RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 GAS6Q14393 721 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 GPNMBQ14956 572 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 DECR1Q16698 335 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 SAPCD1Q5SSQ6 148 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 UBXN11Q5T124 520 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 MEPCEQ7L2J0 689 aaKnown RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 CEACAM19Q7Z692 300 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 OR4D9Q8NGE8 314 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 OR1J2Q8NGS2 313 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 OR4Q3Q8NH05 313 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 LKAAEAR1Q8TD35 194 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ASB11Q8WXH4 323 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 C14orf79Q96F83 325 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ZNF558Q96NG5 402 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 KLHL5Q96PQ7 755 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 CLCC1Q96S66 551 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 GFI1Q99684 422 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 TINF2Q9BSI4 451 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 MED10Q9BTT4 135 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 NDC1Q9BTX1 674 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ADAT1Q9BUB4 502 aaKnown RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 SLC17A9Q9BYT1 436 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 OR52A5Q9H2C5 316 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 GPBP1L1Q9HC44 474 aaPredicted RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ASF1BQ9NVP2 202 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 GAR1Q9NY12 217 aaKnown RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 CCNL1Q9UK58 526 aaPredicted RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 STARD10Q9Y365 291 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 A0A087WWC5 75 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 OR5H14A6NHG9 310 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 RNASEK-C17orf49H0YIS7 233 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 GPR39O43194 453 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 MOCS2O96007 188 aaPredicted RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 OR8G3PP0DMU2 310 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 TXNP10599 105 aaKnown RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 DAOP14920 347 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 CD22P20273 847 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 GABRR1P24046 479 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 NFYBP25208 207 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ACRV1P26436 265 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 GDF5P43026 501 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 HSD17B7P56937 341 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 PFN3P60673 137 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 SRSF3P84103 164 aaKnown RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ACSM2AQ08AH3 577 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 MADCAM1Q13477 382 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 CBFBQ13951 182 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 MRPL58Q14197 206 aaKnown RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 CPSF6Q16630 551 aaKnown RBP eCLIP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 HAGHQ16775 308 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ZNF791Q3KP31 576 aaPredicted RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ACSM3Q53FZ2 586 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ACSM2BQ68CK6 577 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 PWWP2BQ6NUJ5 590 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 SCN4BQ8IWT1 228 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 LGALS14Q8TCE9 139 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ST7LQ8TDW4 575 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 HASPINQ8TF76 798 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 SMIM19Q96E16 107 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 RCC1LQ96I51 464 aaKnown RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ZNF607Q96SK3 696 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ACBD6Q9BR61 282 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ACTR3CQ9C0K3 210 aaPredicted RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ISG20L2Q9H9L3 353 aaKnown RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 RHOFQ9HBH0 211 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 METTL21EPA6NDL7 271 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 OR2W5A6NFC9 320 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 IFITM5A6NNB3 132 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 TXNL1O43396 289 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 RAMP2O60895 175 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 GLCEO94923 617 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 PPP1R3DO95685 299 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 CD2P06729 351 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 SFTA3P0C7M3 94 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ALPPL2P10696 532 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 SNRPBP14678 240 aaKnown RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ZNF14P17017 642 aaPredicted RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 HMGB2P26583 209 aaKnown RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 PCSK1P29120 753 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 MAP3K8P41279 467 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 RBM34P42696 430 aaKnown RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ST8SIA6P61647 398 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 TNFRSF9Q07011 255 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 CCINQ13939 588 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 CDK5R1Q15078 307 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 DEFB115Q30KQ5 88 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ZNF750Q32MQ0 723 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 HIST2H3PS2Q5TEC6 136 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 NKAIN2Q5VXU1 208 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 TPGS2Q68CL5 300 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 B3GLCTQ6Y288 498 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 ZNF620Q6ZNG0 422 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 CD163Q86VB7 1156 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 COMTD1Q86VU5 262 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 GLB1L2Q8IW92 636 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 BAP18Q8IXM2 172 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 GTPBP8Q8N3Z3 284 aaPredicted RBP4.42□□□□□ -1.7
PRKD3-210ENST00000494667 OR5AK2Q8NH90 309 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 M1APQ8TC57 530 aa4.42□□□□□ -1.7
PRKD3-210ENST00000494667 SLC38A5Q8WUX1 472 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms