RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 EPHA5P54756 1037 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF239Q16600 458 aaKnown RBP7.35□□□□□ -1.23
BRCA1-221ENST00000493795 WBP2NLQ6ICG8 309 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 FCRLAQ7L513 359 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 SLC51BQ86UW2 128 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 BORCS6Q96GS4 357 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 TCTN2Q96GX1 697 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 GALNT9Q9HCQ5 603 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 RANGRFQ9HD47 186 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-221ENST00000493795 UGT2A1Q9Y4X1 527 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 SPO11Q9Y5K1 396 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 CLTCL1P53675 1640 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 SOWAHBA6NEL2 793 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 NCBP2LA6PVI3 153 aaKnown RBP7.35□□□□□ -1.23
BRCA1-221ENST00000493795 SLC16A6O15403 523 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 SPINT2O43291 252 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 DDAH2O95865 285 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 SOD2P04179 222 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF888P0CJ79 500 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-221ENST00000493795 MTHFD2P13995 350 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 SLC1A3P43003 542 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 HNRNPA3P51991 378 aaKnown RBP7.35□□□□□ -1.23
BRCA1-221ENST00000493795 KHDC1LQ5JSQ8 128 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 SIAH1Q8IUQ4 282 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 ENTHD1Q8IYW4 607 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 PQLC3Q8N755 202 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 H1FXQ92522 213 aaKnown RBP7.35□□□□□ -1.23
BRCA1-221ENST00000493795 L3HYPDHQ96EM0 354 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 TRIB1Q96RU8 372 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 ALG12Q9BV10 488 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 MRPL22Q9NWU5 206 aaKnown RBP7.35□□□□□ -1.23
BRCA1-221ENST00000493795 SPHK1Q9NYA1 384 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 PBRM1Q86U86 1689 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 FZD7O75084 574 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF217O75362 1048 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 OR2C1O95371 312 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 G0S2P27469 103 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 ZXDBP98169 803 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 TAGLNQ01995 201 aaKnown RBP7.35□□□□□ -1.23
BRCA1-221ENST00000493795 BCL7AQ4VC05 210 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 MFSD6LQ8IWD5 586 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF516Q92618 1163 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF845Q96IR2 970 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-221ENST00000493795 NPY6RQ99463 290 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 SOX7Q9BT81 388 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 ABHD6Q9BV23 337 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 NECAP2Q9NVZ3 263 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 B3GAT1Q9P2W7 334 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 URGCP-MRPS24S4R325 110 aa7.35□□□□□ -1.23
BRCA1-221ENST00000493795 A0A0U1RQF3 1178 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 NUDT19A8MXV4 375 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 GABRPO00591 440 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF623O75123 536 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 SORBS2O94875 1100 aaKnown RBP7.34□□□□□ -1.23
BRCA1-221ENST00000493795 MBP02144 154 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 RFC3P40938 356 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 SLC11A1P49279 550 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 CDKN2DP55273 166 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 WDR5P61964 334 aaKnown RBP7.34□□□□□ -1.23
BRCA1-221ENST00000493795 HSF1Q00613 529 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 CPZQ66K79 652 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF626Q68DY1 528 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 PIWIL3Q7Z3Z3 882 aaKnown RBP7.34□□□□□ -1.23
BRCA1-221ENST00000493795 MRGPRX2Q96LB1 330 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF300Q96RE9 604 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-221ENST00000493795 NUDT22Q9BRQ3 303 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 NTPCRQ9BSD7 190 aaKnown RBP7.34□□□□□ -1.23
BRCA1-221ENST00000493795 STYXL1Q9Y6J8 313 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 TMEM212A6NML5 194 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 HSPB6O14558 160 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 C5AR1P21730 350 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 DCTP40126 519 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 CASP7P55210 303 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 GPLD1P80108 840 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 VEZF1Q14119 521 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 NR0B2Q15466 257 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 PGGHGQ32M88 737 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 C6orf132Q5T0Z8 1188 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 SPRYD7Q5W111 196 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 IGDCC3Q8IVU1 814 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 OR10G3Q8NGC4 313 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 KCNG3Q8TAE7 436 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 SEC22CQ9BRL7 303 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 INPP5KQ9BT40 448 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 TMEM43Q9BTV4 400 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 BOKQ9UMX3 212 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-221ENST00000493795 MRPS28Q9Y2Q9 187 aaKnown RBP7.34□□□□□ -1.23
BRCA1-221ENST00000493795 ENTPD2Q9Y5L3 495 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 PTPRMP28827 1452 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 AGLP35573 1532 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 HSD17B6O14756 317 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 COCHO43405 550 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 GPRIN2O60269 458 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 GPR32O75388 356 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 ENPP1P22413 925 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 HTR2CP28335 458 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 TNFSF8P32971 234 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 TAS2R45P59539 299 aa7.34□□□□□ -1.23
BRCA1-221ENST00000493795 UBE2IP63279 158 aaKnown RBP7.34□□□□□ -1.23
BRCA1-221ENST00000493795 ELAVL3Q14576 367 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms