RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 GPNMBQ14956 572 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 DPYSL2Q16555 572 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 CCDC152Q4G0S7 254 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 CFAP157Q5JU67 520 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 C1orf100Q5SVJ3 147 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 KCNIP4Q6PIL6 250 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 CCDC80Q76M96 950 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 ATP6V0D2Q8N8Y2 350 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 DCAF4L2Q8NA75 395 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 SUMF2Q8NBJ7 301 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 PAGE5Q96GU1 130 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 SEC22AQ96IW7 307 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 TTC25Q96NG3 672 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 OXGR1Q96P68 337 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 MTMR9Q96QG7 549 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 NRIP2Q9BQI9 281 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 GORASP2Q9H8Y8 452 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 AIG1Q9NVV5 245 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 V9GY05 133 aa2.35□□□□□ -2.03
SMC4-223ENST00000493695 RLFQ13129 1914 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 TRAV26-1A0A087WT03 109 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 E9PBE3 544 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 RAMP3O60896 148 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 SCGNO76038 276 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 AP2A1O95782 977 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 RBMY1CP0DJD4 496 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 RPS2P15880 293 aaKnown RBP2.34□□□□□ -2.03
SMC4-223ENST00000493695 COX7A1P24310 79 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 GCAP28676 217 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 PRDX3P30048 256 aaKnown RBP2.34□□□□□ -2.03
SMC4-223ENST00000493695 HTR1FP30939 366 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 RBMXP38159 391 aaKnown RBP2.34□□□□□ -2.03
SMC4-223ENST00000493695 QARSP47897 775 aaKnown RBP2.34□□□□□ -2.03
SMC4-223ENST00000493695 IFNAR2P48551 515 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 KPNA2P52292 529 aaKnown RBP2.34□□□□□ -2.03
SMC4-223ENST00000493695 DLX1P56177 255 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 UBE2HP62256 183 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 GPM6BQ13491 265 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 PDK3Q15120 406 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 EXOC3L2Q2M3D2 409 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 PARP15Q460N3 678 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 ANKDD1AQ495B1 522 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 LRRC31Q6UY01 552 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 Q6ZPB1 254 aaPredicted RBP2.34□□□□□ -2.03
SMC4-223ENST00000493695 CCDC50Q8IVM0 306 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 FTMTQ8N4E7 242 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 DCUN1D4Q92564 292 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 RAPGEF5Q92565 580 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 UBE2E3Q969T4 207 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 TM4SF19Q96DZ7 209 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 CHRDL1Q9BU40 450 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 NT5C3AQ9H0P0 336 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 NARFLQ9H6Q4 476 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 NTN4Q9HB63 628 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 C6orf203Q9P0P8 240 aaPredicted RBP2.34□□□□□ -2.03
SMC4-223ENST00000493695 ASF1AQ9Y294 204 aa2.34□□□□□ -2.03
SMC4-223ENST00000493695 ARHGAP21Q5T5U3 1957 aa2.34□□□□□ -2.04
SMC4-223ENST00000493695 LOC110117498-PIK3R3F6TDL0 507 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 H0YCG3 227 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 NBR2O15453 112 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 GMFGO60234 142 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 POU2F1P14859 743 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 GLRA2P23416 452 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 CXCR2P25025 360 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 SHMT2P34897 504 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 NUDT1P36639 197 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 OPRD1P41143 372 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 CCT3P49368 545 aaKnown RBP2.33□□□□□ -2.04
SMC4-223ENST00000493695 HNMTP50135 292 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 TIMM10P62072 90 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 CHIT1Q13231 466 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 NSDHLQ15738 373 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 MPPED2Q15777 294 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 BCL7AQ4VC05 210 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 CTRB2Q6GPI1 263 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 OR4F3Q6IEY1 312 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 COX15Q7KZN9 410 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 SLC35F2Q8IXU6 374 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 LRRC75A-AS1Q8N1F1 130 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 ZNF786Q8N393 782 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 PNKDQ8N490 385 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 ARL6IP6Q8N6S5 226 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 MFSD9Q8NBP5 474 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 ZNF740Q8NDX6 193 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 OR4K14Q8NGD5 310 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 UCN3Q969E3 161 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 RPUSD4Q96CM3 377 aaKnown RBP2.33□□□□□ -2.04
SMC4-223ENST00000493695 KCNA7Q96RP8 456 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 MBOAT4Q96T53 435 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 OR11A1Q9GZK7 315 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 POLR2J2Q9GZM3 115 aaKnown RBP2.33□□□□□ -2.04
SMC4-223ENST00000493695 POLR2J3Q9H1A7 115 aaKnown RBP2.33□□□□□ -2.04
SMC4-223ENST00000493695 REEP4Q9H6H4 257 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 YY1AP1Q9H869 796 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 SLC25A22Q9H936 323 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 TREM2Q9NZC2 230 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 EXTL2Q9UBQ6 330 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 STAP1Q9ULZ2 295 aa2.33□□□□□ -2.04
SMC4-223ENST00000493695 RPL36Q9Y3U8 105 aaKnown RBP2.33□□□□□ -2.04
SMC4-223ENST00000493695 RPAP1Q9BWH6 1393 aaPredicted RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms