RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 GPR4P46093 362 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 CLK1P49759 484 aaKnown RBP15.42■□□□□ 0.06
LIME1-208ENST00000493265 RPS3AP61247 264 aaKnown RBP15.42■□□□□ 0.06
LIME1-208ENST00000493265 EIF2S3LQ2VIR3 472 aaKnown RBP15.42■□□□□ 0.06
LIME1-208ENST00000493265 TMPPEQ6ZT21 453 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 MBOAT2Q6ZWT7 520 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 PM20D2Q8IYS1 436 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 HS3ST5Q8IZT8 346 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 ICA1LQ8NDH6 482 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 ST6GALNAC3Q8NDV1 305 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 OR9Q2Q8NGE9 314 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 OR4C15Q8NGM1 316 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 PIGXQ8TBF5 258 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 FAM57AQ8TBR7 257 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 SGTBQ96EQ0 304 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 FAM46AQ96IP4 442 aaKnown RBP15.42■□□□□ 0.06
LIME1-208ENST00000493265 TRIB1Q96RU8 372 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 BDH2Q9BUT1 245 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 ZNF426Q9BUY5 554 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 PTDSS2Q9BVG9 487 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 SRXN1Q9BYN0 137 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 POTEKPQ9BYX7 375 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 KLHL4Q9C0H6 718 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 PRDM14Q9GZV8 571 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 NTN4Q9HB63 628 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 HDGFL3Q9Y3E1 203 aa15.42■□□□□ 0.06
LIME1-208ENST00000493265 SAC3D1A6NKF1 404 aa15.41■□□□□ 0.06
LIME1-208ENST00000493265 PRRG2O14669 202 aa15.41■□□□□ 0.06
LIME1-208ENST00000493265 FUT1P19526 365 aa15.41■□□□□ 0.06
LIME1-208ENST00000493265 DNAJA1P31689 397 aaKnown RBP15.41■□□□□ 0.06
LIME1-208ENST00000493265 LIMS1P48059 325 aa15.41■□□□□ 0.06
LIME1-208ENST00000493265 C5orf46Q6UWT4 87 aa15.41■□□□□ 0.06
LIME1-208ENST00000493265 CDK20Q8IZL9 346 aa15.41■□□□□ 0.06
LIME1-208ENST00000493265 BPIFA2Q96DR5 249 aa15.41■□□□□ 0.06
LIME1-208ENST00000493265 ADGRG7Q96K78 797 aa15.41■□□□□ 0.06
LIME1-208ENST00000493265 MOGAT1Q96PD6 335 aa15.41■□□□□ 0.06
LIME1-208ENST00000493265 FUZQ9BT04 418 aa15.41■□□□□ 0.06
LIME1-208ENST00000493265 SLC19A3Q9BZV2 496 aa15.41■□□□□ 0.06
LIME1-208ENST00000493265 TIGARQ9NQ88 270 aa15.41■□□□□ 0.06
LIME1-208ENST00000493265 PDP1Q9P0J1 537 aaPredicted RBP15.41■□□□□ 0.06
LIME1-208ENST00000493265 MAGED1Q9Y5V3 778 aaPredicted RBP15.41■□□□□ 0.06
LIME1-208ENST00000493265 CENPEQ02224 2701 aa15.41■□□□□ 0.06
LIME1-208ENST00000493265 ITPR2Q14571 2701 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 LIPT2A6NK58 231 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 CLCA1A8K7I4 914 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 KDM4EB2RXH2 506 aaPredicted RBP15.4■□□□□ 0.06
LIME1-208ENST00000493265 AKR7A3O95154 331 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 SYNGR4O95473 234 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 PMS2P2O95744 297 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 BGLAPP02818 100 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 POU2F1P14859 743 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 ZNF23P17027 643 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 KLK2P20151 261 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 MAKP20794 623 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 PRKACGP22612 351 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 COL8A1P27658 744 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 GRPRP30550 384 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 HMGA2P52926 109 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 CSNK2A1P68400 391 aaPredicted RBP15.4■□□□□ 0.06
LIME1-208ENST00000493265 SLC35A1P78382 337 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 IL1RL1Q01638 556 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 PRKCDQ05655 676 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 LTBQ06643 244 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 MICAQ29983 383 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 EMC4Q5J8M3 183 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 FAM69AQ5T7M9 428 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 RNF113BQ8IZP6 322 aaKnown RBP15.4■□□□□ 0.06
LIME1-208ENST00000493265 PQLC1Q8N2U9 271 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 LRRC17Q8N6Y2 441 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 OR10G2Q8NGC3 310 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 PRR7Q8TB68 274 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 GIPC3Q8TF64 312 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 ROBO4Q8WZ75 1007 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 CENPNQ96H22 339 aaPredicted RBP15.4■□□□□ 0.06
LIME1-208ENST00000493265 PRRG4Q9BZD6 226 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 KRCC1Q9NPI7 259 aaPredicted RBP15.4■□□□□ 0.06
LIME1-208ENST00000493265 SEC14L4Q9UDX3 406 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 TINAGQ9UJW2 476 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 OSGIN2Q9Y236 505 aa15.4■□□□□ 0.06
LIME1-208ENST00000493265 DNAJC13O75165 2243 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 TRGV8A0A0C4DH27 118 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 EFCAB9A8MZ26 197 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 OR2T1O43869 369 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 OR7A10O76100 309 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 SAGP10523 405 aaPredicted RBP15.39■□□□□ 0.05
LIME1-208ENST00000493265 ANPEPP15144 967 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 ARHGDIAP52565 204 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 PON3Q15166 354 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 ZNF74Q16587 644 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 ZNF787Q6DD87 383 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 RPTNQ6XPR3 784 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 P4HA3Q7Z4N8 544 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 AQP11Q8NBQ7 271 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 OR5K1Q8NHB7 308 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 MFSD8Q8NHS3 518 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 GTPBP3Q969Y2 492 aaKnown RBP15.39■□□□□ 0.05
LIME1-208ENST00000493265 ZHX1-C8orf76Q96EF9 292 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 UCN2Q96RP3 112 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 ASPNQ9BXN1 380 aa15.39■□□□□ 0.05
LIME1-208ENST00000493265 NANSQ9NR45 359 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms