RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 MVDP53602 400 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 STX1BP61266 288 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 MAGOHP61326 146 aaKnown RBP10.94□□□□□ -0.66
COL6A1-205ENST00000492851 IRX1P78414 480 aaPredicted RBP10.94□□□□□ -0.66
COL6A1-205ENST00000492851 OR7A5Q15622 319 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 ZNF311Q5JNZ3 666 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 C6orf10Q5SRN2 563 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 TSPO2Q5TGU0 170 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 ZNF836Q6ZNA1 936 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 GPAT4Q86UL3 456 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 CADM2Q8N3J6 435 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 OR9K2Q8NGE7 335 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 STK35Q8TDR2 534 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 DNAJA3Q96EY1 480 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 BCL2L10Q9HD36 194 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 SLC17A5Q9NRA2 495 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 SLC7A10Q9NS82 523 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 RLIMQ9NVW2 624 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 RASD1Q9Y272 281 aa10.94□□□□□ -0.66
COL6A1-205ENST00000492851 ZNF443Q9Y2A4 671 aaPredicted RBP10.94□□□□□ -0.66
COL6A1-205ENST00000492851 ARID1AO14497 2285 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 ZC3H12DA2A288 527 aaKnown RBP10.93□□□□□ -0.66
COL6A1-205ENST00000492851 C5orf58C9J3I9 102 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 E7EQL1 145 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 H7C417 338 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 OR2T1O43869 369 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 SSX4O60224 188 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 AKR7A3O95154 331 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 C1QCP02747 245 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 GKN3PP0CG01 181 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 HOXB1P14653 301 aaPredicted RBP10.93□□□□□ -0.66
COL6A1-205ENST00000492851 PPIBP23284 216 aaKnown RBP10.93□□□□□ -0.66
COL6A1-205ENST00000492851 APOBEC3AP31941 199 aaPredicted RBP10.93□□□□□ -0.66
COL6A1-205ENST00000492851 MAPK11Q15759 364 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 SLC9B1Q4ZJI4 515 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 C1orf140Q5VVS0 124 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 CLEC2AQ6UVW9 174 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 C5orf46Q6UWT4 87 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 VRK2Q86Y07 508 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 TMEM99Q8N816 258 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 WDR31Q8NA23 367 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 ANKK1Q8NFD2 765 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 OR52E4Q8NGH9 312 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 TMEM19Q96HH6 336 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 SPATA5L1Q9BVQ7 753 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 CACNG6Q9BXT2 260 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 C12orf10Q9HB07 376 aa10.93□□□□□ -0.66
COL6A1-205ENST00000492851 FBXO9Q9UK97 447 aaPredicted RBP10.93□□□□□ -0.66
COL6A1-205ENST00000492851 NUP214P35658 2090 aaPredicted RBP10.93□□□□□ -0.66
COL6A1-205ENST00000492851 VSTM5A8MXK1 200 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 ZNF587BE7ETH6 402 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 CLIC1O00299 241 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 CD5LO43866 347 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 AHSA1O95433 338 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 IFNA2P01563 188 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 CSF3P09919 207 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 BMP2P12643 396 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 ETS2P15036 469 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 GTF2E2P29084 291 aaKnown RBP10.92□□□□□ -0.66
COL6A1-205ENST00000492851 MRPL19P49406 292 aaKnown RBP10.92□□□□□ -0.66
COL6A1-205ENST00000492851 UBE2NP61088 152 aaKnown RBP10.92□□□□□ -0.66
COL6A1-205ENST00000492851 RGNQ15493 299 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 EPGNQ6UW88 154 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 CREB3L2Q70SY1 520 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 NET1Q7Z628 596 aaPredicted RBP10.92□□□□□ -0.66
COL6A1-205ENST00000492851 KRT73Q86Y46 540 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 GOLGA6L1Q8N7Z2 621 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 ZIC4Q8N9L1 334 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 BHLHE22Q8NFJ8 381 aaPredicted RBP10.92□□□□□ -0.66
COL6A1-205ENST00000492851 MFSD8Q8NHS3 518 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 BBS10Q8TAM1 723 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 GTF2H4Q92759 462 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 TLCD1Q96CP7 247 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 AURKBQ96GD4 344 aaPredicted RBP10.92□□□□□ -0.66
COL6A1-205ENST00000492851 KCNS3Q9BQ31 491 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 EVA1AQ9H8M9 152 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 TMBIM4Q9HC24 238 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 A4GALTQ9NPC4 353 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 SLC6A13Q9NSD5 602 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 ADPRHL2Q9NX46 363 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 RPS6KB2Q9UBS0 482 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 GDF2Q9UK05 429 aaPredicted RBP10.92□□□□□ -0.66
COL6A1-205ENST00000492851 PCDHB14Q9Y5E9 798 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 ATP23Q9Y6H3 246 aa10.92□□□□□ -0.66
COL6A1-205ENST00000492851 A0A1W2PR80 420 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 POLR3GO15318 223 aaPredicted RBP10.91□□□□□ -0.66
COL6A1-205ENST00000492851 NPIPB7O75200 414 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 PNMTP11086 282 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 SLC25A16P16260 332 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 PRKAR1BP31321 381 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 SH3BGRP55822 239 aaPredicted RBP10.91□□□□□ -0.66
COL6A1-205ENST00000492851 C3orf36Q3SXR2 165 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 C9orf135Q5VTT2 229 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 C11orf71Q6IPW1 123 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 PRIMA1Q86XR5 153 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 CLIP4Q8N3C7 705 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 FAM169BQ8N8A8 192 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 LSMEM1Q8N8F7 131 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 OR10H5Q8NGA6 315 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 MAGEE2Q8TD90 523 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms