RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 SEC14L4Q9UDX3 406 aa4.34□□□□□ -1.71
SND1-216ENST00000492840 SLC7A8Q9UHI5 535 aa4.34□□□□□ -1.71
SND1-216ENST00000492840 ABCG2Q9UNQ0 655 aa4.34□□□□□ -1.71
SND1-216ENST00000492840 GMPPBQ9Y5P6 360 aa4.34□□□□□ -1.71
SND1-216ENST00000492840 SDK1Q7Z5N4 2213 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 PLIN4Q96Q06 1357 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 IGKV6D-41A0A0C4DH26 115 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 ZNF840PA6NDX5 716 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 ACOD1A6NK06 481 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 B8ZZF3 427 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 C9JVG2 144 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 RAMP3O60896 148 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 PAHP00439 452 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 GAPDHP04406 335 aaKnown RBP4.33□□□□□ -1.72
SND1-216ENST00000492840 LGALS2P05162 132 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 IGFBP1P08833 259 aaPredicted RBP4.33□□□□□ -1.72
SND1-216ENST00000492840 OR9G9P0C7N8 305 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 IMPDH1P20839 514 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 CPN2P22792 545 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 ATP5A1P25705 553 aaKnown RBP4.33□□□□□ -1.72
SND1-216ENST00000492840 ATP5C1P36542 298 aaKnown RBP4.33□□□□□ -1.72
SND1-216ENST00000492840 CDKN2AP42771 156 aaKnown RBP4.33□□□□□ -1.72
SND1-216ENST00000492840 SSR1P43307 286 aaKnown RBP4.33□□□□□ -1.72
SND1-216ENST00000492840 TSFMP43897 325 aaKnown RBP4.33□□□□□ -1.72
SND1-216ENST00000492840 CXCL12P48061 93 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 CDH6P55285 790 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 C21orf59P57076 290 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 LINC00205P59089 165 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 PLP1P60201 277 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 OTUD4Q01804 1114 aaKnown RBP4.33□□□□□ -1.72
SND1-216ENST00000492840 OGDHQ02218 1023 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 MERTKQ12866 999 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 FAM189A2Q15884 450 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 MICBQ29980 383 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 HSDL1Q3SXM5 330 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 SLC25A52Q3SY17 297 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 OTUD3Q5T2D3 398 aaPredicted RBP4.33□□□□□ -1.72
SND1-216ENST00000492840 WSCD1Q658N2 575 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 SLC35E4Q6ICL7 350 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 EIF3MQ7L2H7 374 aaKnown RBP4.33□□□□□ -1.72
SND1-216ENST00000492840 ZNF771Q7L3S4 317 aaPredicted RBP4.33□□□□□ -1.72
SND1-216ENST00000492840 APTXQ7Z2E3 356 aaKnown RBP4.33□□□□□ -1.72
SND1-216ENST00000492840 LUZP2Q86TE4 346 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 TRIM69Q86WT6 500 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 SLC39A11Q8N1S5 342 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 SLC16A11Q8NCK7 471 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 ZNRF1Q8ND25 227 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 DEFB124Q8NES8 71 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 OR4C5Q8NGB2 326 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 TBCKQ8TEA7 893 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 C11orf52Q96A22 123 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 DNAJA3Q96EY1 480 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 ZNF778Q96MU6 729 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 ZNF300Q96RE9 604 aaPredicted RBP4.33□□□□□ -1.72
SND1-216ENST00000492840 FAM173AQ9BQD7 235 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 CENPKQ9BS16 269 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 ZBP1Q9H171 429 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 GOLGA2P5Q9HBQ8 144 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 ADGRL4Q9HBW9 690 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 TMEM9BQ9NQ34 198 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 PDP1Q9P0J1 537 aaPredicted RBP4.33□□□□□ -1.72
SND1-216ENST00000492840 PRPF19Q9UMS4 504 aaKnown RBP4.33□□□□□ -1.72
SND1-216ENST00000492840 PPP1R3CQ9UQK1 317 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 EXOGQ9Y2C4 368 aaKnown RBP4.33□□□□□ -1.72
SND1-216ENST00000492840 CSNK1G3Q9Y6M4 447 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 CREBBPQ92793 2442 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 CACNA1EQ15878 2313 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 DOPEY2Q9Y3R5 2298 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 MYH7P12883 1935 aa4.33□□□□□ -1.72
SND1-216ENST00000492840 PTPRQQ9UMZ3 2332 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 URB1O60287 2271 aaKnown RBP4.32□□□□□ -1.72
SND1-216ENST00000492840 F5P12259 2224 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 ZBED9Q6R2W3 1325 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 FRG2CA6NGY1 282 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 RNF212BA8MTL3 300 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 GOLGA8SH3BPF8 625 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 M0QZ92 97 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 POLR2DO15514 142 aaKnown RBP4.32□□□□□ -1.72
SND1-216ENST00000492840 MAGEC1O60732 1142 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 RAMP1O60894 148 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 DIRAS1O95057 198 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 NXPH4O95158 308 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 CRYAAP02489 173 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 FTH1P02794 183 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 RPL13AP40429 203 aaKnown RBP4.32□□□□□ -1.72
SND1-216ENST00000492840 OPRL1P41146 370 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 CRYBB2P43320 205 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 RPS5P46782 204 aaKnown RBP4.32□□□□□ -1.72
SND1-216ENST00000492840 SLC7A2P52569 658 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 NDST2P52849 883 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 SNAP25P60880 206 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 KLRB1Q12918 225 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 PEX6Q13608 980 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 KIAA0141Q14154 515 aaPredicted RBP4.32□□□□□ -1.72
SND1-216ENST00000492840 FASTKQ14296 549 aaKnown RBP4.32□□□□□ -1.72
SND1-216ENST00000492840 IZUMO4Q1ZYL8 232 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 KLHL40Q2TBA0 621 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 FFAR4Q5NUL3 377 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 SEL1L2Q5TEA6 688 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 AGBL2Q5U5Z8 902 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms