RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 DEFB113Q30KQ7 82 aa21.79■■□□□ 1.08
UPF3A-209ENST00000492270 FBXW9Q5XUX1 488 aa21.79■■□□□ 1.08
UPF3A-209ENST00000492270 C6orf89Q6UWU4 347 aa21.79■■□□□ 1.08
UPF3A-209ENST00000492270 SEZ6L2Q6UXD5 910 aa21.79■■□□□ 1.08
UPF3A-209ENST00000492270 LSMEM1Q8N8F7 131 aa21.79■■□□□ 1.08
UPF3A-209ENST00000492270 STK35Q8TDR2 534 aa21.79■■□□□ 1.08
UPF3A-209ENST00000492270 KTI12Q96EK9 354 aaPredicted RBP21.79■■□□□ 1.08
UPF3A-209ENST00000492270 ALPK1Q96QP1 1244 aa21.79■■□□□ 1.08
UPF3A-209ENST00000492270 TESQ9UGI8 421 aaKnown RBP21.79■■□□□ 1.08
UPF3A-209ENST00000492270 AHSA1O95433 338 aa21.78■■□□□ 1.08
UPF3A-209ENST00000492270 CNOT4O95628 575 aaKnown RBP21.78■■□□□ 1.08
UPF3A-209ENST00000492270 PCGF2P35227 344 aa21.78■■□□□ 1.08
UPF3A-209ENST00000492270 RPS5P46782 204 aaKnown RBP21.78■■□□□ 1.08
UPF3A-209ENST00000492270 STK11Q15831 433 aa21.78■■□□□ 1.08
UPF3A-209ENST00000492270 MMEL1Q495T6 779 aa21.78■■□□□ 1.08
UPF3A-209ENST00000492270 ZNF433Q8N7K0 673 aaPredicted RBP21.78■■□□□ 1.08
UPF3A-209ENST00000492270 GPR32P1Q8NGA4 272 aa21.78■■□□□ 1.08
UPF3A-209ENST00000492270 OR9K2Q8NGE7 335 aa21.78■■□□□ 1.08
UPF3A-209ENST00000492270 LRRC58Q96CX6 371 aa21.78■■□□□ 1.08
UPF3A-209ENST00000492270 TRIM2Q9C040 744 aa21.78■■□□□ 1.08
UPF3A-209ENST00000492270 ARMCX1Q9P291 453 aa21.78■■□□□ 1.08
UPF3A-209ENST00000492270 SLC9A8Q9Y2E8 581 aa21.78■■□□□ 1.08
UPF3A-209ENST00000492270 ZNF469Q96JG9 3925 aaPredicted RBP21.78■■□□□ 1.08
UPF3A-209ENST00000492270 LOC100653049A0A140TA62 436 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 FTCDNL1E5RQL4 147 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 M0QX08 132 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 M0R3H8 397 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 KRT34O76011 436 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 PTNP21246 168 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 NCALDP61601 193 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 FAPQ12884 760 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 CYLC2Q14093 348 aaPredicted RBP21.77■■□□□ 1.08
UPF3A-209ENST00000492270 DUSP7Q16829 419 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 COQ5Q5HYK3 327 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 ALG10BQ5I7T1 473 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 ZNF704Q6ZNC4 412 aaPredicted RBP21.77■■□□□ 1.08
UPF3A-209ENST00000492270 GPAT4Q86UL3 456 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 P3H2Q8IVL5 708 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 ZIC4Q8N9L1 334 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 BHLHE22Q8NFJ8 381 aaPredicted RBP21.77■■□□□ 1.08
UPF3A-209ENST00000492270 HSD17B8Q92506 261 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 SLC25A36Q96CQ1 311 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 ZNF385AQ96PM9 386 aaKnown RBP21.77■■□□□ 1.08
UPF3A-209ENST00000492270 C12orf10Q9HB07 376 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 MRGBPQ9NV56 204 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 SEC14L4Q9UDX3 406 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 MALT1Q9UDY8 824 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 SLC13A4Q9UKG4 626 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 USP22Q9UPT9 525 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 CAPN7Q9Y6W3 813 aa21.77■■□□□ 1.08
UPF3A-209ENST00000492270 IGKV1D-42A0A075B6H8 117 aa21.76■■□□□ 1.07
UPF3A-209ENST00000492270 BBIP1A8MTZ0 92 aa21.76■■□□□ 1.07
UPF3A-209ENST00000492270 ATP8B1O43520 1251 aa21.76■■□□□ 1.07
UPF3A-209ENST00000492270 RAD51DO75771 328 aa21.76■■□□□ 1.07
UPF3A-209ENST00000492270 MAPRE2Q15555 327 aa21.76■■□□□ 1.07
UPF3A-209ENST00000492270 OR1Q1Q15612 314 aa21.76■■□□□ 1.07
UPF3A-209ENST00000492270 ACKR1Q16570 336 aa21.76■■□□□ 1.07
UPF3A-209ENST00000492270 MFSD8Q8NHS3 518 aa21.76■■□□□ 1.07
UPF3A-209ENST00000492270 TAMM41Q96BW9 452 aa21.76■■□□□ 1.07
UPF3A-209ENST00000492270 ARHGDIGQ99819 225 aa21.76■■□□□ 1.07
UPF3A-209ENST00000492270 SLC7A10Q9NS82 523 aa21.76■■□□□ 1.07
UPF3A-209ENST00000492270 CADP27708 2225 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 A0A0B4J2E0 115 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 A0A1B0GX12 115 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 LGI1O95970 557 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 PNMTP11086 282 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 GGT1P19440 569 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 CD247P20963 164 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 CRYBA2P53672 197 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 NR1H2P55055 460 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 NPTX1Q15818 432 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 NRF1Q16656 503 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 VMACQ2NL98 169 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 TSPO2Q5TGU0 170 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 TMEM225Q6GV28 225 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 ULK3Q6PHR2 472 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 CALHM3Q86XJ0 350 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 POU5F2Q8N7G0 328 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 RNF217Q8TC41 542 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 DNAJA4Q8WW22 397 aaPredicted RBP21.75■■□□□ 1.07
UPF3A-209ENST00000492270 TAAR8Q969N4 342 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 TMEM45BQ96B21 275 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 TMEM204Q9BSN7 226 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 SF3B5Q9BWJ5 86 aaKnown RBP21.75■■□□□ 1.07
UPF3A-209ENST00000492270 ASB6Q9NWX5 421 aa21.75■■□□□ 1.07
UPF3A-209ENST00000492270 ITGA5P08648 1049 aa21.74■■□□□ 1.07
UPF3A-209ENST00000492270 C9orf135Q5VTT2 229 aa21.74■■□□□ 1.07
UPF3A-209ENST00000492270 FAM91A1Q658Y4 838 aa21.74■■□□□ 1.07
UPF3A-209ENST00000492270 PATL1Q86TB9 770 aaKnown RBP21.74■■□□□ 1.07
UPF3A-209ENST00000492270 RANBP3LQ86VV4 465 aaPredicted RBP21.74■■□□□ 1.07
UPF3A-209ENST00000492270 RBM45Q8IUH3 476 aaKnown RBP21.74■■□□□ 1.07
UPF3A-209ENST00000492270 SLC30A8Q8IWU4 369 aa21.74■■□□□ 1.07
UPF3A-209ENST00000492270 KDM8Q8N371 416 aa21.74■■□□□ 1.07
UPF3A-209ENST00000492270 OR8J3Q8NGG0 315 aa21.74■■□□□ 1.07
UPF3A-209ENST00000492270 OR4D11Q8NGI4 311 aa21.74■■□□□ 1.07
UPF3A-209ENST00000492270 SLC38A4Q969I6 547 aa21.74■■□□□ 1.07
UPF3A-209ENST00000492270 TMEM27Q9HBJ8 222 aa21.74■■□□□ 1.07
UPF3A-209ENST00000492270 PARPBPQ9NWS1 579 aa21.74■■□□□ 1.07
UPF3A-209ENST00000492270 CCT8L1PA6NM43 557 aa21.73■■□□□ 1.07
UPF3A-209ENST00000492270 PDLIM1O00151 329 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms