RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 MS4A2Q01362 244 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 TFF3Q07654 80 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 RASGEF1BQ0VAM2 473 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 RNPS1Q15287 305 aaKnown RBP12.84□□□□□ -0.35
HLA-F-229ENST00000489502 OTUD3Q5T2D3 398 aaPredicted RBP12.84□□□□□ -0.35
HLA-F-229ENST00000489502 LCN8Q6JVE9 175 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 FAM214BQ7L5A3 538 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 BTLAQ7Z6A9 289 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 TSEN54Q7Z6J9 526 aaKnown RBP12.84□□□□□ -0.35
HLA-F-229ENST00000489502 LUZP2Q86TE4 346 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 NKAIN4Q8IVV8 208 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 TUSC5Q8IXB3 177 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 OFCC1Q8IZS5 231 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 TMEM99Q8N816 258 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 TMEM255BQ8WV15 326 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 TAAR8Q969N4 342 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 ZNF775Q96BV0 537 aaPredicted RBP12.84□□□□□ -0.35
HLA-F-229ENST00000489502 STARD4Q96DR4 205 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 BTBD10Q9BSF8 475 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 TMEM43Q9BTV4 400 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 OPN3Q9H1Y3 402 aaPredicted RBP12.84□□□□□ -0.35
HLA-F-229ENST00000489502 C12orf49Q9H741 205 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 KCNJ16Q9NPI9 418 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 NPDC1Q9NQX5 325 aaPredicted RBP12.84□□□□□ -0.35
HLA-F-229ENST00000489502 ACTR3BQ9P1U1 418 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 KLHL9Q9P2J3 617 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 PLEKHB1Q9UF11 243 aaPredicted RBP12.84□□□□□ -0.35
HLA-F-229ENST00000489502 RIMS3Q9UJD0 308 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 ING1Q9UK53 422 aaPredicted RBP12.84□□□□□ -0.35
HLA-F-229ENST00000489502 EMC9Q9Y3B6 208 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 ENPP4Q9Y6X5 453 aa12.84□□□□□ -0.35
HLA-F-229ENST00000489502 FREM1Q5H8C1 2179 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 ZNF716A6NP11 495 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 FFAR1O14842 300 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 PIP5K1CO60331 668 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 DNAJC8O75937 253 aaPredicted RBP12.83□□□□□ -0.36
HLA-F-229ENST00000489502 DIRAS1O95057 198 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 SEMG1P04279 462 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 CRHP06850 196 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 GTF2E2P29084 291 aaKnown RBP12.83□□□□□ -0.36
HLA-F-229ENST00000489502 GRPRP30550 384 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 ASCL1P50553 236 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 UGT2B15P54855 530 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 H3F3AP84243 136 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 TRIM25Q14258 630 aaKnown RBP12.83□□□□□ -0.36
HLA-F-229ENST00000489502 FAM69AQ5T7M9 428 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 PAQR6Q6TCH4 344 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 LINC00114Q6XXX2 140 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.83□□□□□ -0.36
HLA-F-229ENST00000489502 NUFIP2Q7Z417 695 aaKnown RBP12.83□□□□□ -0.36
HLA-F-229ENST00000489502 DHFR2Q86XF0 187 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 SLC43A2Q8N370 569 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 C10orf53Q8N6V4 93 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 OR6K3Q8NGY3 331 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 PFN4Q8NHR9 129 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 MFSD8Q8NHS3 518 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 PIGXQ8TBF5 258 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 ASB9Q96DX5 294 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 PYURFQ96I23 114 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 MOGAT1Q96PD6 335 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 EPYCQ99645 322 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 ZNF426Q9BUY5 554 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 CADM1Q9BY67 442 aaKnown RBP12.83□□□□□ -0.36
HLA-F-229ENST00000489502 POLR2J2Q9GZM3 115 aaKnown RBP12.83□□□□□ -0.36
HLA-F-229ENST00000489502 POLR2J3Q9H1A7 115 aaKnown RBP12.83□□□□□ -0.36
HLA-F-229ENST00000489502 MUC13Q9H3R2 512 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 MAN2C1Q9NTJ4 1040 aa12.83□□□□□ -0.36
HLA-F-229ENST00000489502 C6orf203Q9P0P8 240 aaPredicted RBP12.83□□□□□ -0.36
HLA-F-229ENST00000489502 KLF2Q9Y5W3 355 aaPredicted RBP12.83□□□□□ -0.36
HLA-F-229ENST00000489502 PKDREJQ9NTG1 2253 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 TCRBV5S2A0A599 114 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 AQP7P3A6NL99 342 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 ENO4A6NNW6 628 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 M0R082 166 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 EIF1BO60739 113 aaKnown RBP12.82□□□□□ -0.36
HLA-F-229ENST00000489502 PRSS23O95084 383 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 BGLAPP02818 100 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 MT-ND1P03886 318 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 EDNRAP25101 427 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 P2RY4P51582 365 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 LTBQ06643 244 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 TMEM201Q5SNT2 666 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 TTC33Q6PID6 262 aaPredicted RBP12.82□□□□□ -0.36
HLA-F-229ENST00000489502 C5orf46Q6UWT4 87 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 ZNF417Q8TAU3 575 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 MCUR1Q96AQ8 359 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 MPP4Q96JB8 637 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 C7orf34Q96L11 122 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 ZNF587Q96SQ5 575 aaPredicted RBP12.82□□□□□ -0.36
HLA-F-229ENST00000489502 SEPHS2Q99611 448 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 NAA11Q9BSU3 229 aaPredicted RBP12.82□□□□□ -0.36
HLA-F-229ENST00000489502 PIGMQ9H3S5 423 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 MEPEQ9NQ76 525 aaPredicted RBP12.82□□□□□ -0.36
HLA-F-229ENST00000489502 GLRX2Q9NS18 164 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 NDUFAF4Q9P032 175 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 PROCRQ9UNN8 238 aa12.82□□□□□ -0.36
HLA-F-229ENST00000489502 GSC2O15499 205 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 FZD7O75084 574 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 CGAP01215 116 aa12.81□□□□□ -0.36
HLA-F-229ENST00000489502 UQCRC1P31930 480 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms