RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 ZNF24P17028 368 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 NCS1P62166 190 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 C17orf67Q0P5P2 114 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 ZNF846Q147U1 533 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 ZNF311Q5JNZ3 666 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 ENTPD8Q5MY95 495 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 FAM180AQ6UWF9 173 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 Q6ZNX1 250 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 VRK2Q86Y07 508 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 PLCZ1Q86YW0 608 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 PEX5LQ8IYB4 626 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 ZNF843Q8N446 348 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 TMEM251Q8N6I4 163 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 OR52P1PQ8NH57 321 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 OIT3Q8WWZ8 545 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 S100ZQ8WXG8 99 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 SH3YL1Q96HL8 342 aaPredicted RBP17.54■□□□□ 0.4
CCM2-216ENST00000488727 KLHDC3Q9BQ90 382 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 WDR12Q9GZL7 423 aaKnown RBP17.54■□□□□ 0.4
CCM2-216ENST00000488727 TSPAN10Q9H1Z9 355 aaPredicted RBP17.54■□□□□ 0.4
CCM2-216ENST00000488727 UBQLN3Q9H347 655 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 SDHAF3Q9NRP4 125 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 ASF1BQ9NVP2 202 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 MED11Q9P086 117 aa17.54■□□□□ 0.4
CCM2-216ENST00000488727 IGLV3-32A0A0A0MS00 114 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 EFCAB9A8MZ26 197 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 PTHP01270 115 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 DBIP07108 87 aaKnown RBP17.53■□□□□ 0.4
CCM2-216ENST00000488727 GSTM3P21266 225 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 OPRL1P41146 370 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 MAGEA5P43359 124 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 PPIAP62937 165 aaKnown RBP17.53■□□□□ 0.4
CCM2-216ENST00000488727 TUBA1BP68363 451 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 ZNF117Q03924 483 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 OCLNQ16625 522 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 ANKDD1AQ495B1 522 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 SLC25A30Q5SVS4 291 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 ZNF324BQ6AW86 544 aaPredicted RBP17.53■□□□□ 0.4
CCM2-216ENST00000488727 CBLN3Q6UW01 205 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 CASP12Q6UXS9 341 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 TUBA1AQ71U36 451 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 ZER1Q7Z7L7 766 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 SIAH3Q8IW03 269 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 FADS6Q8N9I5 356 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 OR8J1Q8NGP2 316 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 AKIP1Q9NQ31 210 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 OSGIN1Q9UJX0 560 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.53■□□□□ 0.4
CCM2-216ENST00000488727 CHST2Q9Y4C5 530 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 SHANK1Q9Y566 2161 aa17.53■□□□□ 0.4
CCM2-216ENST00000488727 CLDN25C9JDP6 229 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 H3BN98 237 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 GMFGO60234 142 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 SOX14O95416 240 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 CELA3AP09093 270 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 NID1P14543 1247 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 ZNF12P17014 697 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 MST1P26927 711 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 ADH7P40394 386 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 LSM3P62310 102 aaKnown RBP17.52■□□□□ 0.4
CCM2-216ENST00000488727 RNLSQ5VYX0 342 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 ZNF836Q6ZNA1 936 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 SLC22A16Q86VW1 577 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 MISPQ8IVT2 679 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 OR2M3Q8NG83 312 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 RPL3LQ92901 407 aaKnown RBP17.52■□□□□ 0.4
CCM2-216ENST00000488727 DACH2Q96NX9 599 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 POLDIP3Q9BY77 421 aaKnown RBP17.52■□□□□ 0.4
CCM2-216ENST00000488727 DSN1Q9H410 356 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 HMG20AQ9NP66 347 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 SLC13A4Q9UKG4 626 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 ZNF443Q9Y2A4 671 aaPredicted RBP17.52■□□□□ 0.4
CCM2-216ENST00000488727 CARD8Q9Y2G2 431 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 CORINQ9Y5Q5 1042 aa17.52■□□□□ 0.4
CCM2-216ENST00000488727 TFECO14948 347 aaPredicted RBP17.52■□□□□ 0.39
CCM2-216ENST00000488727 HCRTR2O43614 444 aa17.52■□□□□ 0.39
CCM2-216ENST00000488727 AIREO43918 545 aa17.52■□□□□ 0.39
CCM2-216ENST00000488727 ENTPD6O75354 484 aa17.52■□□□□ 0.39
CCM2-216ENST00000488727 CSTAP01040 98 aa17.52■□□□□ 0.39
CCM2-216ENST00000488727 CRYABP02511 175 aaKnown RBP17.52■□□□□ 0.39
CCM2-216ENST00000488727 IGFBP1P08833 259 aaPredicted RBP17.52■□□□□ 0.39
CCM2-216ENST00000488727 UBL4AP11441 157 aa17.52■□□□□ 0.39
CCM2-216ENST00000488727 FOXD4Q12950 439 aaPredicted RBP17.52■□□□□ 0.39
CCM2-216ENST00000488727 SKP2Q13309 424 aa17.52■□□□□ 0.39
CCM2-216ENST00000488727 ADCK1Q86TW2 530 aa17.52■□□□□ 0.39
CCM2-216ENST00000488727 FAM71CQ8NEG0 241 aa17.52■□□□□ 0.39
CCM2-216ENST00000488727 B4GALNT2Q8NHY0 566 aa17.52■□□□□ 0.39
CCM2-216ENST00000488727 ARSGQ96EG1 525 aa17.52■□□□□ 0.39
CCM2-216ENST00000488727 RACGAP1Q9H0H5 632 aa17.52■□□□□ 0.39
CCM2-216ENST00000488727 ZDHHC11Q9H8X9 412 aa17.52■□□□□ 0.39
CCM2-216ENST00000488727 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.52■□□□□ 0.39
CCM2-216ENST00000488727 KLHL28Q9NXS3 571 aa17.52■□□□□ 0.39
CCM2-216ENST00000488727 IFT52Q9Y366 437 aa17.52■□□□□ 0.39
CCM2-216ENST00000488727 PMF1-BGLAPU3KQ54 211 aa17.52■□□□□ 0.39
CCM2-216ENST00000488727 SVILO95425 2214 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 ACOT7O00154 380 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 ZNF264O43296 627 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 CBR3O75828 277 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 THBS1P07996 1170 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 GADD45AP24522 165 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms