RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 COQ10BQ9H8M1 238 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 PDP1Q9P0J1 537 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-229ENST00000486665 C6orf203Q9P0P8 240 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-229ENST00000486665 STOML1Q9UBI4 398 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 APCP25054 2843 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 DIDO1Q9BTC0 2240 aaKnown RBP11.47□□□□□ -0.57
HDAC6-229ENST00000486665 MED12Q93074 2177 aa11.47□□□□□ -0.57
HDAC6-229ENST00000486665 ENO4A6NNW6 628 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 FTCDNL1E5RQL4 147 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 PDLIM1O00151 329 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 EIF1AYO14602 144 aaKnown RBP11.46□□□□□ -0.57
HDAC6-229ENST00000486665 OR10H3O60404 316 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 ATP6V1G2O95670 118 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 CH25HO95992 272 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 BGLAPP02818 100 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 CPN1P15169 458 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 FUT1P19526 365 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 FKBP2P26885 142 aaKnown RBP11.46□□□□□ -0.57
HDAC6-229ENST00000486665 CTBP2P56545 445 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 OR2B6P58173 313 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 ARHGAP11AQ6P4F7 1023 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 TMPPEQ6ZT21 453 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 RRM2BQ7LG56 351 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 SLC46A3Q7Z3Q1 461 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 EPHX4Q8IUS5 362 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 GHDCQ8N2G8 530 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 LRRC17Q8N6Y2 441 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 OR10G2Q8NGC3 310 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 OR2V1Q8NHB1 315 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 OSTF1Q92882 214 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 BPIFA2Q96DR5 249 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 SGTBQ96EQ0 304 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 NRBF2Q96F24 287 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 FAM46AQ96IP4 442 aaKnown RBP11.46□□□□□ -0.57
HDAC6-229ENST00000486665 MOGAT1Q96PD6 335 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 SMURF2Q9HAU4 748 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 RNPEPL1Q9HAU8 725 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 OAZ3Q9UMX2 235 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 HDGFL3Q9Y3E1 203 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 OTOGQ6ZRI0 2925 aa11.46□□□□□ -0.57
HDAC6-229ENST00000486665 CSMD2Q7Z408 3487 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 FBN2P35556 2912 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 LIPT2A6NK58 231 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 GJE1A6NN92 205 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 G3V2T6 193 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 CDC42EP2O14613 210 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 KLF4O43474 513 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 CXCL13O43927 109 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 OR7A10O76100 309 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 AHSA1O95433 338 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 ZNF23P17027 643 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 KLK2P20151 261 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 PTGS2P35354 604 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 IDUAP35475 653 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 GPR4P46093 362 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 DIO1P49895 249 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 DAPP51397 102 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 CARD18P57730 90 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 SLC34A1Q06495 639 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 GK3PQ14409 553 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 OR7A5Q15622 319 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 ZNF74Q16587 644 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 LPCAT4Q643R3 524 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 HBMQ6B0K9 141 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 C1orf94Q6P1W5 598 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 ESPNLQ6ZVH7 1005 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 TMPRSS11FQ6ZWK6 438 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 STK32CQ86UX6 486 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 HIPK1Q86Z02 1210 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 MEIOBQ8N635 442 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 C10orf53Q8N6V4 93 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 AQP11Q8NBQ7 271 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 OR5M9Q8NGP3 310 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 OR10D3Q8NH80 312 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 MFSD8Q8NHS3 518 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 PIGXQ8TBF5 258 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 GNPDA2Q8TDQ7 276 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 SARAFQ96BY9 339 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 SLC25A36Q96CQ1 311 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 ZNF845Q96IR2 970 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-229ENST00000486665 FEVQ99581 238 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 SRXN1Q9BYN0 137 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 PRDM14Q9GZV8 571 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 PNPLA3Q9NST1 481 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 SEC14L4Q9UDX3 406 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 CAMK2AQ9UQM7 478 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 TRAPPC4Q9Y296 219 aa11.45□□□□□ -0.58
HDAC6-229ENST00000486665 SVILO95425 2214 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 ZGRF1Q86YA3 2104 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 OR14I1A6ND48 311 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 EFCAB9A8MZ26 197 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 ZNF814B7Z6K7 855 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 SULT2B1O00204 365 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 PMS2P2O95744 297 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 IGF2P01344 180 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 EDN3P14138 238 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 POU2F1P14859 743 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 GRPRP30550 384 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 EIF1AXP47813 144 aaKnown RBP11.44□□□□□ -0.58
HDAC6-229ENST00000486665 GSSP48637 474 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms