RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 PTDSS2Q9BVG9 487 aa17.25■□□□□ 0.35
SNX5-213ENST00000486039 TAPBPLQ9BX59 468 aa17.25■□□□□ 0.35
SNX5-213ENST00000486039 C12orf10Q9HB07 376 aa17.25■□□□□ 0.35
SNX5-213ENST00000486039 ADPRHL2Q9NX46 363 aa17.25■□□□□ 0.35
SNX5-213ENST00000486039 RPS6KB2Q9UBS0 482 aa17.25■□□□□ 0.35
SNX5-213ENST00000486039 SLC9A8Q9Y2E8 581 aa17.25■□□□□ 0.35
SNX5-213ENST00000486039 VPS13CQ709C8 3753 aa17.25■□□□□ 0.35
SNX5-213ENST00000486039 PRR14LQ5THK1 2151 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 ACANP16112 2415 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 ELOA3DA6NLF2 546 aaPredicted RBP17.24■□□□□ 0.35
SNX5-213ENST00000486039 FTCDNL1E5RQL4 147 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 M0QX08 132 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 OPN1SWP03999 348 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 MDH1P40925 334 aaKnown RBP17.24■□□□□ 0.35
SNX5-213ENST00000486039 FOXG1P55316 489 aaPredicted RBP17.24■□□□□ 0.35
SNX5-213ENST00000486039 STK11Q15831 433 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 TRMT5Q32P41 509 aaKnown RBP17.24■□□□□ 0.35
SNX5-213ENST00000486039 ELOA3BQ3SY89 546 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 NANOGP8Q6NSW7 305 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 CASP12Q6UXS9 341 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 ZNF704Q6ZNC4 412 aaPredicted RBP17.24■□□□□ 0.35
SNX5-213ENST00000486039 SMYD1Q8NB12 490 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 WFDC11Q8NEX6 87 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 BHLHE22Q8NFJ8 381 aaPredicted RBP17.24■□□□□ 0.35
SNX5-213ENST00000486039 ELOA3Q8NG57 546 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 OR9K2Q8NGE7 335 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 OR52E4Q8NGH9 312 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 TMEM45BQ96B21 275 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 KTI12Q96EK9 354 aaPredicted RBP17.24■□□□□ 0.35
SNX5-213ENST00000486039 ZNF385AQ96PM9 386 aaKnown RBP17.24■□□□□ 0.35
SNX5-213ENST00000486039 SF3B5Q9BWJ5 86 aaKnown RBP17.24■□□□□ 0.35
SNX5-213ENST00000486039 TRIM2Q9C040 744 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 GSX1Q9H4S2 264 aaPredicted RBP17.24■□□□□ 0.35
SNX5-213ENST00000486039 NANOGQ9H9S0 305 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 BEX4Q9NWD9 120 aaPredicted RBP17.24■□□□□ 0.35
SNX5-213ENST00000486039 MALT1Q9UDY8 824 aa17.24■□□□□ 0.35
SNX5-213ENST00000486039 PDLIM1O00151 329 aa17.23■□□□□ 0.35
SNX5-213ENST00000486039 FXYD1O00168 92 aa17.23■□□□□ 0.35
SNX5-213ENST00000486039 AHSA1O95433 338 aa17.23■□□□□ 0.35
SNX5-213ENST00000486039 GGT1P19440 569 aa17.23■□□□□ 0.35
SNX5-213ENST00000486039 RPS5P46782 204 aaKnown RBP17.23■□□□□ 0.35
SNX5-213ENST00000486039 RGS8P57771 180 aaPredicted RBP17.23■□□□□ 0.35
SNX5-213ENST00000486039 FAPQ12884 760 aa17.23■□□□□ 0.35
SNX5-213ENST00000486039 DUSP7Q16829 419 aa17.23■□□□□ 0.35
SNX5-213ENST00000486039 COQ5Q5HYK3 327 aa17.23■□□□□ 0.35
SNX5-213ENST00000486039 ALG10BQ5I7T1 473 aa17.23■□□□□ 0.35
SNX5-213ENST00000486039 NCMAPQ5T1S8 102 aa17.23■□□□□ 0.35
SNX5-213ENST00000486039 REP15Q6BDI9 236 aa17.23■□□□□ 0.35
SNX5-213ENST00000486039 GPAT4Q86UL3 456 aa17.23■□□□□ 0.35
SNX5-213ENST00000486039 MFSD8Q8NHS3 518 aa17.23■□□□□ 0.35
SNX5-213ENST00000486039 ZNF317Q96PQ6 595 aaPredicted RBP17.23■□□□□ 0.35
SNX5-213ENST00000486039 MRGBPQ9NV56 204 aa17.23■□□□□ 0.35
SNX5-213ENST00000486039 PARPBPQ9NWS1 579 aa17.23■□□□□ 0.35
SNX5-213ENST00000486039 ASB6Q9NWX5 421 aa17.23■□□□□ 0.35
SNX5-213ENST00000486039 KLHL14Q9P2G3 628 aa17.23■□□□□ 0.35
SNX5-213ENST00000486039 TESQ9UGI8 421 aaKnown RBP17.23■□□□□ 0.35
SNX5-213ENST00000486039 RAI1Q7Z5J4 1906 aaPredicted RBP17.22■□□□□ 0.35
SNX5-213ENST00000486039 IGKV1D-42A0A075B6H8 117 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 RAD51DO75771 328 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 ITGA5P08648 1049 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 HOXB4P17483 251 aaPredicted RBP17.22■□□□□ 0.35
SNX5-213ENST00000486039 HOXC12P31275 282 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 CYLC2Q14093 348 aaPredicted RBP17.22■□□□□ 0.35
SNX5-213ENST00000486039 OR1Q1Q15612 314 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 RABL3Q5HYI8 236 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 TIMM23BQ5SRD1 257 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 TSPO2Q5TGU0 170 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 TMEM225Q6GV28 225 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 ULK3Q6PHR2 472 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 C20orf204Q6ZNR8 217 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 GPR32P1Q8NGA4 272 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 C10orf82Q8WW14 230 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 DNAJA4Q8WW22 397 aaPredicted RBP17.22■□□□□ 0.35
SNX5-213ENST00000486039 SLC25A36Q96CQ1 311 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 LRRC58Q96CX6 371 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 PIP5K1AQ99755 562 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 ARHGDIGQ99819 225 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 PIF1Q9H611 641 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 SLC7A10Q9NS82 523 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 TAS2R16Q9NYV7 291 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 SLC13A4Q9UKG4 626 aa17.22■□□□□ 0.35
SNX5-213ENST00000486039 A0A0B4J2E0 115 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 LOC100653049A0A140TA62 436 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 A0A1B0GX12 115 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 DPRXA6NFQ7 191 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 OR5H1A6NKK0 313 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 M0R3H8 397 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 MRASO14807 208 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 FZD7O75084 574 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 KRT34O76011 436 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 VAMP5O95183 116 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 LGI1O95970 557 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 PNMTP11086 282 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 PCGF2P35227 344 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 NCALDP61601 193 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 PPA1Q15181 289 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 VMACQ2NL98 169 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 MMEL1Q495T6 779 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 FAM91A1Q658Y4 838 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 AAED1Q7RTV5 226 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms