RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 BBS4Q96RK4 519 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 CD180Q99467 661 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF416Q9BWM5 594 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 HCAR1Q9BXC0 346 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 ACTRT3Q9BYD9 372 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 KRTAP4-5Q9BYR2 181 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 AICDAQ9GZX7 198 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 RSPH9Q9H1X1 276 aaPredicted RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 OR2AG1Q9H205 316 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 GPN1Q9HCN4 374 aaPredicted RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 NRIP3Q9NQ35 241 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 IFT46Q9NQC8 304 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 EXOSC3Q9NQT5 275 aaKnown RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 ZC4H2Q9NQZ6 224 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 CA10Q9NS85 328 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 SIDT1Q9NXL6 827 aaKnown RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 COQ3Q9NZJ6 369 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 DUX4Q9UBX2 424 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 IL36AQ9UHA7 158 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 TAC3Q9UHF0 121 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 OPN4Q9UHM6 478 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 CES1P1Q9UKY3 287 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 ICAM5Q9UMF0 924 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 PPIEQ9UNP9 301 aaKnown RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 RCE1Q9Y256 329 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 YBX2Q9Y2T7 364 aaKnown RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 KCNK7Q9Y2U2 307 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF175Q9Y473 711 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 ETV7Q9Y603 341 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 MUC22E2RYF6 1773 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 GOLGB1Q14789 3259 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 TBC1D3EA0A087X179 549 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ARPC4-TTLL3A0A0A6YYG9 625 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 A0A1B0GVC2 190 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 A0A1W2PQ45 241 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 A0A1W2PQY0 241 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 A0A1W2PR48 441 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ZC3H12DA2A288 527 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 TRAPPC13A5PLN9 417 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 A6NIN4 97 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 FAM183AA6NL82 134 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 DUXAA6NLW8 204 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 IFITM5A6NNB3 132 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 RIIAD1A6NNX1 92 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF879B4DU55 563 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 D6RAR5 112 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 PRR23D1E9PI22 279 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 NPIPB6E9PJ23 425 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 DNASE2O00115 360 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 KPNA3O00505 521 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 PCDH8O95206 1070 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 NTN1O95631 604 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 HPP00738 406 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 IFNGP01579 166 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 CXCL10P02778 98 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 LPLP06858 475 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 MELTFP08582 738 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 OR2T7P0C7T2 308 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 UBBP0CG47 229 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 UBCP0CG48 685 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 PRR23D2P0DMB1 279 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 RPA2P15927 270 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF3P17036 446 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 PRKACAP17612 351 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 CSNK2A2P19784 350 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 MAKP20794 623 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 DRD5P21918 477 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 HIST1H1TP22492 207 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 NFYAP23511 347 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ATP5A1P25705 553 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 DDX6P26196 483 aaKnown RBP eCLIP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 DPP4P27487 766 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 HTR2AP28223 471 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 MPGP29372 298 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 AHRP35869 848 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 MC3RP41968 323 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 RAD52P43351 418 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 PTH2RP49190 550 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 FLT3LGP49771 235 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 PDX1P52945 283 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 PPP2CBP62714 309 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 RPS27AP62979 156 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 UBA52P62987 128 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 PPP2CAP67775 309 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 S100A12P80511 92 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 MAT1AQ00266 395 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 DUSP2Q05923 314 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 SLC3A1Q07837 685 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 FGL1Q08830 312 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 DUSP8Q13202 625 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 CRHR2Q13324 411 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 CRMP1Q14194 572 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF169Q14929 603 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 SLC9A5Q14940 896 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ETFDHQ16134 617 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ISXQ2M1V0 245 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ARHGAP11BQ3KRB8 267 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 PABPC1L2AQ5JQF8 200 aa4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF660Q6AZW8 331 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-206ENST00000485737 OR5M10Q6IEU7 315 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms