RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 GSTK1Q9Y2Q3 226 aa1.5□□□□□ -2.17
VPS50-216ENST00000484954 FRMPD3Q5JV73 1810 aa1.5□□□□□ -2.17
VPS50-216ENST00000484954 TUBGCP6Q96RT7 1819 aa1.5□□□□□ -2.17
VPS50-216ENST00000484954 CARMIL1Q5VZK9 1371 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 IGLV11-55A0A075B6I3 123 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 CTAGE5O15320 804 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 RS1O15537 224 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 PPIAL4GP0DN37 164 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 KIF5BP33176 963 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 CACNG7P62955 275 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 CNTN2Q02246 1040 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 ATP6AP1Q15904 470 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 RFX4Q33E94 735 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 CBLN3Q6UW01 205 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 CATSPER4Q7RTX7 472 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 MMAAQ8IVH4 418 aaKnown RBP1.49□□□□□ -2.17
VPS50-216ENST00000484954 OR4F15Q8NGB8 312 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 OR4K14Q8NGD5 310 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 OR4D9Q8NGE8 314 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 MYLPFQ96A32 169 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 C14orf79Q96F83 325 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 LINC00477Q96M19 166 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 SLC35A5Q9BS91 424 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 ALG12Q9BV10 488 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 ULBP2Q9BZM5 246 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 SRMSQ9H3Y6 488 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 SMYD3Q9H7B4 428 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 SIAEQ9HAT2 523 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 ZFP14Q9HCL3 533 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 QPCTLQ9NXS2 382 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 MGAT4BQ9UQ53 548 aa1.49□□□□□ -2.17
VPS50-216ENST00000484954 FBN1P35555 2871 aaKnown RBP1.49□□□□□ -2.17
VPS50-216ENST00000484954 PLAC8L1A1L4L8 177 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 RBMY1BA6NDE4 496 aaKnown RBP1.48□□□□□ -2.17
VPS50-216ENST00000484954 RBMY1EA6NEQ0 496 aaKnown RBP1.48□□□□□ -2.17
VPS50-216ENST00000484954 B4GALT5O43286 388 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 NEBLO76041 1014 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 ADCY5O95622 1261 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 C6orf47O95873 294 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 RBMY1DP0C7P1 496 aaKnown RBP1.48□□□□□ -2.17
VPS50-216ENST00000484954 RBMY1A1P0DJD3 496 aaKnown RBP1.48□□□□□ -2.17
VPS50-216ENST00000484954 NPY1RP25929 384 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 ANXA13P27216 316 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 STARD6P59095 220 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 MXD4Q14582 209 aaPredicted RBP1.48□□□□□ -2.17
VPS50-216ENST00000484954 MARCH8Q5T0T0 291 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 PRR9Q5T870 116 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 RAET1GQ6H3X3 334 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 SLC26A11Q86WA9 606 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 OR2L13Q8N349 312 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 CMTM7Q96FZ5 175 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 PAGE5Q96GU1 130 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 BMFQ96LC9 184 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 MRPL13Q9BYD1 178 aaKnown RBP1.48□□□□□ -2.17
VPS50-216ENST00000484954 NXF5Q9H1B4 397 aaKnown RBP1.48□□□□□ -2.17
VPS50-216ENST00000484954 MEAF6Q9HAF1 191 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 SLC40A1Q9NP59 571 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 NGBQ9NPG2 151 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 SLC25A15Q9Y619 301 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 PLA2R1Q13018 1463 aa1.48□□□□□ -2.17
VPS50-216ENST00000484954 NSG1A0A0A6YYJ2 146 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 KIR2DS1A0A191URI9 304 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 TRDCB7Z8K6 153 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 CHADO15335 359 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 CXCL13O43927 109 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 OPN1MWP04001 364 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 LGALS2P05162 132 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 IGKV4-1P06312 121 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 CISD3P0C7P0 127 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 OPN1MW2P0DN77 364 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 OPN1MW3P0DN78 364 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 CNR1P21554 472 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 DNAJB1P25685 340 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 GLP1RP43220 463 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 PLA2G16P53816 162 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 HSD17B7P56937 341 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 RIPK1Q13546 671 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 KIR2DS1Q14954 304 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 GUCA2BQ16661 112 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 TP53I3Q53FA7 332 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 NANOGP8Q6NSW7 305 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 ZNF880Q6PDB4 577 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 LYPD2Q6UXB3 125 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 ISLR2Q6UXK2 745 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 GRAMD2AQ8IUY3 354 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 OR52P1PQ8NH57 321 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 MGARPQ8TDB4 240 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 MCOLN3Q8TDD5 553 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 MRPS31Q92665 395 aaKnown RBP1.47□□□□□ -2.17
VPS50-216ENST00000484954 TMEM237Q96Q45 408 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 TMEM246Q9BRR3 403 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 NDFIP1Q9BT67 221 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 POLR1EQ9GZS1 481 aaKnown RBP1.47□□□□□ -2.17
VPS50-216ENST00000484954 SPNS1Q9H2V7 528 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 SLCO1B3Q9NPD5 702 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 NUDT15Q9NV35 164 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 HOXC10Q9NYD6 342 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 NINJ2Q9NZG7 142 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 AIPL1Q9NZN9 384 aa1.47□□□□□ -2.17
VPS50-216ENST00000484954 GNG12Q9UBI6 72 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms