RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 EFNB1P98172 346 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 FUT5Q11128 374 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 ITGADQ13349 1161 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 GINS1Q14691 196 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 ELOCQ15369 112 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 SPHARQ15513 63 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 SNAPC1Q16533 368 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 TRIM16LQ309B1 348 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 DEFB134Q4QY38 66 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 Q6ZPB1 254 aaPredicted RBP7.08□□□□□ -1.28
SNX13-208ENST00000482558 DCDC5Q6ZRR9 648 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 RBPMS2Q6ZRY4 209 aaKnown RBP7.08□□□□□ -1.28
SNX13-208ENST00000482558 TAF8Q7Z7C8 310 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 ZNF554Q86TJ5 538 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 PARGQ86W56 976 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 FAM185AQ8N0U4 392 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 CSNK1A1LQ8N752 337 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 NANOGP1Q8N7R0 232 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 WDR36Q8NI36 951 aaKnown RBP7.08□□□□□ -1.28
SNX13-208ENST00000482558 NDNFQ8TB73 568 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 SLC2A12Q8TD20 617 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 PIK3R3Q92569 461 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 ZBTB8AQ96BR9 441 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 ERLEC1Q96DZ1 483 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 LRFN5Q96NI6 719 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 CCNL2Q96S94 520 aaPredicted RBP7.08□□□□□ -1.28
SNX13-208ENST00000482558 ZNF559Q9BR84 538 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 TAPBPLQ9BX59 468 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 TSSK6Q9BXA6 273 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 MROQ9BYG7 248 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 ZNF350Q9GZX5 532 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 DSN1Q9H410 356 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 MAN2C1Q9NTJ4 1040 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 IL20Q9NYY1 176 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 EPHA6Q9UF33 1036 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 TESQ9UGI8 421 aaKnown RBP7.08□□□□□ -1.28
SNX13-208ENST00000482558 SSR3Q9UNL2 185 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 BAIAP2Q9UQB8 552 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 ZNF443Q9Y2A4 671 aaPredicted RBP7.08□□□□□ -1.28
SNX13-208ENST00000482558 RPH3AQ9Y2J0 694 aaPredicted RBP7.08□□□□□ -1.28
SNX13-208ENST00000482558 MRPS17Q9Y2R5 130 aaKnown RBP7.08□□□□□ -1.28
SNX13-208ENST00000482558 PCDHGA5Q9Y5G8 931 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 PCDHGA1Q9Y5H4 931 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 PMF1-BGLAPU3KQ54 211 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 COL4A2P08572 1712 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 F5P12259 2224 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 LOC100509620A0A075B734 347 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 A0A087WUU8 490 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 METTL15A6NJ78 407 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 KDM4EB2RXH2 506 aaPredicted RBP7.07□□□□□ -1.28
SNX13-208ENST00000482558 CLDN4O14493 209 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 TLX2O43763 284 aaPredicted RBP7.07□□□□□ -1.28
SNX13-208ENST00000482558 CTSVO60911 334 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 RCBTB2O95199 551 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 EML2O95834 649 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 PTHP01270 115 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 IGHV4-34P06331 123 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 C8orf89P0DMQ9 161 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 ALPPL2P10696 532 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 RPS4Y1P22090 263 aaKnown RBP7.07□□□□□ -1.28
SNX13-208ENST00000482558 GALP22466 123 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 GADD45AP24522 165 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 NUDT6P53370 316 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 DEFA1P59665 94 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 DEFA3P59666 94 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 NCS1P62166 190 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 ZNF91Q05481 1191 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 RUNX1T1Q06455 604 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 DLX2Q07687 328 aaPredicted RBP7.07□□□□□ -1.28
SNX13-208ENST00000482558 RUNX2Q13950 521 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 FAM53BQ14153 422 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 SYT16Q17RD7 645 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 SYT14P1Q58G82 188 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 TCTE1Q5JU00 501 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 SPANXN2Q5MJ10 180 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 FHL5Q5TD97 284 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 TYW3Q6IPR3 259 aaKnown RBP7.07□□□□□ -1.28
SNX13-208ENST00000482558 ZNF613Q6PF04 617 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 FRRS1Q6ZNA5 592 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 KCTD20Q7Z5Y7 419 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 IGFN1Q86VF2 1251 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 GKN2Q86XP6 184 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 RBM45Q8IUH3 476 aaKnown RBP7.07□□□□□ -1.28
SNX13-208ENST00000482558 GRAMD2AQ8IUY3 354 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 GID4Q8IVV7 300 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 ZNF595Q8IYB9 648 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 TDHQ8IZJ6 230 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 SLC34A3Q8N130 599 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 CENPSQ8N2Z9 138 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 STPG3Q8N7X2 389 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 TCEANCQ8N8B7 351 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 COX18Q8N8Q8 333 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 OR2T33Q8NG76 320 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 OR7G2Q8NG99 324 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 OR52L1Q8NGH7 329 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 OR4D11Q8NGI4 311 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 OR10G6Q8NH81 332 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 SLC9A6Q92581 669 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 C16orf58Q96GQ5 468 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 SLC41A3Q96GZ6 507 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms