RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 SLAMF8Q9P0V8 285 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 OR5H1A6NKK0 313 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 AQP7P3A6NL99 342 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 FAM171A2A8MVW0 826 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 VAMP5O95183 116 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 TROVE2P10155 538 aaKnown RBP eCLIP13.53□□□□□ -0.24
CDK9-203ENST00000480353 EDNRAP25101 427 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 AQP1P29972 269 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 ATP5J2P56134 94 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 HOXC5Q00444 222 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 SLC17A1Q14916 467 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 TMEM108Q6UXF1 575 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 BIVMQ86UB2 503 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 HIPK4Q8NE63 616 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 OR9K2Q8NGE7 335 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 OR52E4Q8NGH9 312 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 STK35Q8TDR2 534 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 TMEM204Q9BSN7 226 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 GSX2Q9BZM3 304 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 TMEM27Q9HBJ8 222 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 MALT1Q9UDY8 824 aa13.53□□□□□ -0.24
CDK9-203ENST00000480353 PRR14LQ5THK1 2151 aa13.52□□□□□ -0.24
CDK9-203ENST00000480353 MAP1AP78559 2803 aaPredicted RBP13.52□□□□□ -0.24
CDK9-203ENST00000480353 M0R1B8 84 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 ABCD4O14678 606 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 EDF1O60869 148 aaKnown RBP13.52□□□□□ -0.25
CDK9-203ENST00000480353 INHBBP09529 407 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 CDH2P19022 906 aaPredicted RBP13.52□□□□□ -0.25
CDK9-203ENST00000480353 RPS5P46782 204 aaKnown RBP13.52□□□□□ -0.25
CDK9-203ENST00000480353 ZNF83P51522 516 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 CDH11P55287 796 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 RGS8P57771 180 aaPredicted RBP13.52□□□□□ -0.25
CDK9-203ENST00000480353 NFYCQ13952 458 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 ZNF672Q499Z4 452 aaPredicted RBP13.52□□□□□ -0.25
CDK9-203ENST00000480353 C5orf46Q6UWT4 87 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 PRSS57Q6UWY2 283 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 RANBP3LQ86VV4 465 aaPredicted RBP13.52□□□□□ -0.25
CDK9-203ENST00000480353 ARMC8Q8IUR7 673 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 MSRB3Q8IXL7 192 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 POMGNT2Q8NAT1 580 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 C11orf65Q8NCR3 313 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 KBTBD8Q8NFY9 601 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 SMAP2Q8WU79 429 aaPredicted RBP13.52□□□□□ -0.25
CDK9-203ENST00000480353 DNAJA4Q8WW22 397 aaPredicted RBP13.52□□□□□ -0.25
CDK9-203ENST00000480353 STON2Q8WXE9 905 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 RADILQ96JH8 1075 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 TRIM2Q9C040 744 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 SLCO5A1Q9H2Y9 848 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 PIF1Q9H611 641 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 TMEM38AQ9H6F2 299 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 MRGBPQ9NV56 204 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 MGAT4BQ9UQ53 548 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 RASD1Q9Y272 281 aa13.52□□□□□ -0.25
CDK9-203ENST00000480353 A0A1W2PR80 420 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 DPRXA6NFQ7 191 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 SMAD7O15105 426 aaKnown RBP13.51□□□□□ -0.25
CDK9-203ENST00000480353 OR2T1O43869 369 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 WNT11O96014 354 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 VIMP08670 466 aaKnown RBP13.51□□□□□ -0.25
CDK9-203ENST00000480353 PNMTP11086 282 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 HOXB9P17482 250 aaPredicted RBP13.51□□□□□ -0.25
CDK9-203ENST00000480353 GPX2P18283 190 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 PTAFRP25105 342 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 MMEL1Q495T6 779 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 HSP90B2PQ58FF3 399 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 RUNDC3AQ59EK9 446 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 ALG10BQ5I7T1 473 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 NIPAL3Q6P499 406 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 DHRS4L2Q6PKH6 230 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 SLC22A25Q6T423 547 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 ATG4DQ86TL0 474 aaPredicted RBP13.51□□□□□ -0.25
CDK9-203ENST00000480353 MFSD8Q8NHS3 518 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 SLC26A7Q8TE54 656 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 SLC38A4Q969I6 547 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 TMEM45BQ96B21 275 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 EVA1AQ9H8M9 152 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 SLC7A10Q9NS82 523 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 CISD1Q9NZ45 108 aaKnown RBP13.51□□□□□ -0.25
CDK9-203ENST00000480353 TESQ9UGI8 421 aaKnown RBP13.51□□□□□ -0.25
CDK9-203ENST00000480353 AMDHD2Q9Y303 409 aa13.51□□□□□ -0.25
CDK9-203ENST00000480353 MAGED1Q9Y5V3 778 aaPredicted RBP13.51□□□□□ -0.25
CDK9-203ENST00000480353 HEATR1Q9H583 2144 aaKnown RBP13.51□□□□□ -0.25
CDK9-203ENST00000480353 C2CD3Q4AC94 2353 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 ROS1P08922 2347 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 OR6C65A6NJZ3 312 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 ZNF587BE7ETH6 402 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 ZNF43P17038 809 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 MPGP29372 298 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 MTPNP58546 118 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 C1DQ13901 141 aaKnown RBP13.5□□□□□ -0.25
CDK9-203ENST00000480353 GABRA6Q16445 453 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 TSPO2Q5TGU0 170 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 METTL21CQ5VZV1 264 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 ULK3Q6PHR2 472 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 CLEC9AQ6UXN8 241 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 SLC30A8Q8IWU4 369 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 C17orf78Q8N4C9 275 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 C10orf53Q8N6V4 93 aa13.5□□□□□ -0.25
CDK9-203ENST00000480353 C1orf162Q8NEQ5 155 aaPredicted RBP13.5□□□□□ -0.25
CDK9-203ENST00000480353 TSPEARQ8WU66 669 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms