RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PRAMEF8Q5VWM4 474 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 PRAMEF7Q5VXH5 474 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 GPAT4Q86UL3 456 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 MIER2Q8N344 545 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 OR9K2Q8NGE7 335 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 OR52E4Q8NGH9 312 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 MGARPQ8TDB4 240 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 SLC35B4Q969S0 331 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 ADAM19Q9H013 955 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 MANSC1Q9H8J5 431 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 TPT1P8Q9HAU6 139 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 SDR39U1Q9NRG7 319 aaPredicted RBP12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 SLC7A10Q9NS82 523 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 FBXO9Q9UK97 447 aaPredicted RBP12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 RASD1Q9Y272 281 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 ZNF443Q9Y2A4 671 aaPredicted RBP12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 FKBP7Q9Y680 259 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 ATP23Q9Y6H3 246 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 CSPG4Q6UVK1 2322 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 C5orf58C9J3I9 102 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 PDLIM1O00151 329 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 CD8AP01732 235 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 IMPDH2P12268 514 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 IL12AP29459 219 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 UBE2NP61088 152 aaKnown RBP12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 PLAURQ03405 335 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 FADDQ13158 208 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 CEACAM7Q14002 265 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 COX20Q5RI15 118 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 C5orf46Q6UWT4 87 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 ZNF836Q6ZNA1 936 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 DNM1P46Q6ZS02 220 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 PRIMA1Q86XR5 153 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 MAELQ96JY0 434 aaKnown RBP12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 SPATA9Q9BWV2 254 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 YAE1D1Q9NRH1 226 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 TMEM45AQ9NWC5 275 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 ADPRHL2Q9NX46 363 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 RPS6KB2Q9UBS0 482 aa12.68□□□□□ -0.38
SMARCE1-209ENST00000478349 VPS13CQ709C8 3753 aa12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 A0A1W2PR80 420 aa12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 A8MV72 311 aaPredicted RBP12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 E7EQL1 145 aa12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 AKAP8O43823 692 aaKnown RBP12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 ZNF500O60304 480 aaPredicted RBP12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 AKR7A3O95154 331 aa12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 ETFAP13804 333 aa12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 APOBEC3AP31941 199 aaPredicted RBP12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 POLR2JP52435 117 aaKnown RBP12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 SH3BGRP55822 239 aaPredicted RBP12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 TSPO2Q5TGU0 170 aa12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 C9orf135Q5VTT2 229 aa12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 C1orf140Q5VVS0 124 aa12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 C11orf71Q6IPW1 123 aa12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 PODNL1Q6PEZ8 512 aa12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 MAPK1IP1LQ8NDC0 245 aa12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 BBS10Q8TAM1 723 aa12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 STK35Q8TDR2 534 aa12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 SLC38A5Q8WUX1 472 aa12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 FAM168AQ92567 244 aa12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 TMEM19Q96HH6 336 aa12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 RLIMQ9NVW2 624 aa12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 GDF2Q9UK05 429 aaPredicted RBP12.67□□□□□ -0.38
SMARCE1-209ENST00000478349 ZC3H12DA2A288 527 aaKnown RBP12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 KIAA1324LA8MWY0 1029 aaPredicted RBP12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 VSTM5A8MXK1 200 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 KLF11O14901 512 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 FRS3O43559 492 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 CRYAAP02489 173 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 TFPTP0C1Z6 253 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 GKN3PP0CG01 181 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 PPIBP23284 216 aaKnown RBP12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 EFNA4P52798 201 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 WDR4P57081 412 aaKnown RBP12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 SNRPD2P62316 118 aaKnown RBP12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 KRTAP1-1Q07627 177 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 SPOCK1Q08629 439 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 CHRFAM7AQ494W8 412 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 ZNF311Q5JNZ3 666 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 HMBOX1Q6NT76 420 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 VRK2Q86Y07 508 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 KRT73Q86Y46 540 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 GOLGA6L1Q8N7Z2 621 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 TMEM99Q8N816 258 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 SPATA3Q8NHX4 192 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 BOD1Q96IK1 185 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 SPATA5L1Q9BVQ7 753 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 MYOZ1Q9NP98 299 aaPredicted RBP12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 SELENONQ9NZV5 590 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 RCE1Q9Y256 329 aa12.66□□□□□ -0.38
SMARCE1-209ENST00000478349 ELOA3DA6NLF2 546 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 POLR3GO15318 223 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 OR2T1O43869 369 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 NDUFS7O75251 213 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 ERCC1P07992 297 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 VIMP08670 466 aaKnown RBP12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 HOXB1P14653 301 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 CDH2P19022 906 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 NTF4P34130 210 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 ACAA2P42765 397 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms