RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 C12orf66Q96MD2 445 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 PAIP2Q9BPZ3 127 aaKnown RBP3.29□□□□□ -1.88
UBR3-209ENST00000477461 MRPL57Q9BQC6 102 aaKnown RBP3.29□□□□□ -1.88
UBR3-209ENST00000477461 KATNB1Q9BVA0 655 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 DERL2Q9GZP9 239 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 WWP1Q9H0M0 922 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 TCEAL2Q9H3H9 227 aaPredicted RBP3.29□□□□□ -1.88
UBR3-209ENST00000477461 DPEP2Q9H4A9 486 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 ALG9Q9H6U8 611 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 IMP3Q9NV31 184 aaKnown RBP3.29□□□□□ -1.88
UBR3-209ENST00000477461 ZNF446Q9NWS9 450 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 EURLQ9NYK6 297 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 GPR83Q9NYM4 423 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 CD274Q9NZQ7 290 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 GALPQ9UBC7 116 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 SLC23A2Q9UGH3 650 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 LNPEPQ9UIQ6 1025 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 RARRES3Q9UL19 164 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 TMCO1Q9UM00 188 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 ASF1AQ9Y294 204 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 TDRKHQ9Y2W6 561 aaKnown RBP3.29□□□□□ -1.88
UBR3-209ENST00000477461 CSNK1G3Q9Y6M4 447 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 COLEC10Q9Y6Z7 277 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 CABIN1Q9Y6J0 2220 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 PCM1Q15154 2024 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 LAMA3Q16787 3333 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 GOLGA4Q13439 2230 aaKnown RBP3.28□□□□□ -1.88
UBR3-209ENST00000477461 A0A1B0GTQ1 180 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 TMEM120BA0PK00 339 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 NCF1BA6NI72 391 aaPredicted RBP3.28□□□□□ -1.88
UBR3-209ENST00000477461 A8MU10 97 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 MPTX1A8MV57 137 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 NCF1CA8MVU1 366 aaPredicted RBP3.28□□□□□ -1.88
UBR3-209ENST00000477461 SNURFLB1AK76 121 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 LMO7DNF2Z398 122 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 CDC7O00311 574 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 TM9SF1O15321 606 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 DIAPH2O60879 1101 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 KERAO60938 352 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 LRP3O75074 770 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 PSIP1O75475 530 aaKnown RBP3.28□□□□□ -1.88
UBR3-209ENST00000477461 GUCA1CO95843 209 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 C9P02748 559 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 ANXA5P08758 320 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 ZNF806P0C7X5 589 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 TPBGLP0DKB5 382 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 SPP1P10451 314 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 MYL2P10916 166 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 GFAPP14136 432 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 NCF1P14598 390 aaPredicted RBP3.28□□□□□ -1.88
UBR3-209ENST00000477461 RPL35AP18077 110 aaKnown RBP3.28□□□□□ -1.88
UBR3-209ENST00000477461 XRCC1P18887 633 aaPredicted RBP3.28□□□□□ -1.88
UBR3-209ENST00000477461 ELAVL4P26378 380 aaKnown RBP3.28□□□□□ -1.88
UBR3-209ENST00000477461 OAS2P29728 719 aaKnown RBP3.28□□□□□ -1.88
UBR3-209ENST00000477461 PDHA2P29803 388 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 TIA1P31483 386 aaKnown RBP eCLIP3.28□□□□□ -1.88
UBR3-209ENST00000477461 HSD17B2P37059 387 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 NBL1P41271 181 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 BDKRB1P46663 353 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 OR3A2P47893 321 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 DUSP3P51452 185 aaPredicted RBP3.28□□□□□ -1.88
UBR3-209ENST00000477461 AP1S2P56377 157 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 NAA20P61599 178 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 IL9RQ01113 521 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 TNK1Q13470 666 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 TSNQ15631 228 aaKnown RBP3.28□□□□□ -1.88
UBR3-209ENST00000477461 DEFB133Q30KQ1 61 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 TTMPQ5BVD1 217 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 SULT1C3Q6IMI6 304 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 TCEAL6Q6IPX3 200 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 ABRAXAS1Q6UWZ7 409 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 WASH2PQ6VEQ5 465 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 CPEB2Q7Z5Q1 589 aaKnown RBP3.28□□□□□ -1.88
UBR3-209ENST00000477461 GPR141Q7Z602 305 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 ZNF584Q8IVC4 421 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 NUDCD3Q8IVD9 361 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 SLC22A9Q8IVM8 553 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 TBC1D21Q8IYX1 336 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 CENPLQ8N0S6 344 aaPredicted RBP3.28□□□□□ -1.88
UBR3-209ENST00000477461 TCAIMQ8N3R3 496 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 KLHDC1Q8N7A1 406 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 BANPQ8N9N5 519 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 SUMF1Q8NBK3 374 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 OR6C4Q8NGE1 309 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 CCL4L1Q8NHW4 92 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 RHEBL1Q8TAI7 183 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 RDH11Q8TC12 318 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 MGARPQ8TDB4 240 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 TCP10LQ8TDR4 215 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 SLC26A7Q8TE54 656 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 SETD7Q8WTS6 366 aaKnown RBP3.28□□□□□ -1.88
UBR3-209ENST00000477461 ANKRD49Q8WVL7 239 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 METTL21AQ8WXB1 218 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 NSMAFQ92636 917 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 TCEAL3Q969E4 200 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 CCDC126Q96EE4 140 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 FAM111AQ96PZ2 611 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 INPP5KQ9BT40 448 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 EDEM2Q9BV94 578 aa3.28□□□□□ -1.88
UBR3-209ENST00000477461 HOXD1Q9GZZ0 328 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms