RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 DNAJA2O60884 412 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 NTN1O95631 604 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 PRKAR1BP31321 381 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 DIO1P49895 249 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 POLR2HP52434 150 aaKnown RBP13.42□□□□□ -0.26
VARS-223ENST00000474643 ATP5J2P56134 94 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 NCALDP61601 193 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 ITGADQ13349 1161 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 ADRM1Q16186 407 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 KRTAP21-3Q3LHN1 58 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 SPATS1Q496A3 300 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 SYT14P1Q58G82 188 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 RABL3Q5HYI8 236 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 INTS11Q5TA45 600 aaKnown RBP13.42□□□□□ -0.26
VARS-223ENST00000474643 C22orf34Q6ZV56 151 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 GALNT5Q7Z7M9 940 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 SERPINA11Q86U17 422 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 PTOV1Q86YD1 416 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 BHLHE22Q8NFJ8 381 aaPredicted RBP13.42□□□□□ -0.26
VARS-223ENST00000474643 ZNF775Q96BV0 537 aaPredicted RBP13.42□□□□□ -0.26
VARS-223ENST00000474643 ZNF524Q96C55 264 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 POTEKPQ9BYX7 375 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 GSX2Q9BZM3 304 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 CHRNA9Q9UGM1 479 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 LAMP3Q9UQV4 416 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 TMED7-TICAM2A0A0A6YYA0 188 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 ETV2O00321 342 aaPredicted RBP13.41□□□□□ -0.26
VARS-223ENST00000474643 EBAG9O00559 213 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 FRS3O43559 492 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 ADAM11O75078 769 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 LYZL6O75951 148 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 HEXAP06865 529 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 CXCR1P25024 350 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 TACR3P29371 465 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 SLC1A3P43003 542 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 NUDT2P50583 147 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 RASSF2P50749 326 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 RPS4XP62701 263 aaKnown RBP13.41□□□□□ -0.26
VARS-223ENST00000474643 PPP2R2BQ00005 443 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 PLAURQ03405 335 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 WBP2NLQ6ICG8 309 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 C8orf82Q6P1X6 216 aaPredicted RBP13.41□□□□□ -0.26
VARS-223ENST00000474643 GABRG1Q8N1C3 465 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 ZNF611Q8N823 705 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 RNF217Q8TC41 542 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 FBXW5Q969U6 566 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 DDIT4LQ96D03 193 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 DNAJA3Q96EY1 480 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 TRMT61AQ96FX7 289 aaKnown RBP13.41□□□□□ -0.26
VARS-223ENST00000474643 ALG2Q9H553 416 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 ARL8BQ9NVJ2 186 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 TMED7Q9Y3B3 224 aa13.41□□□□□ -0.26
VARS-223ENST00000474643 CIB4A0PJX0 185 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 TRIM64A6NGJ6 449 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 TRIM64BA6NI03 449 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 M0QX08 132 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 FXYD1O00168 92 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 FAAHO00519 579 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 CYTIPO60759 359 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 TMCC2O75069 709 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 GCM2O75603 506 aaPredicted RBP13.4□□□□□ -0.26
VARS-223ENST00000474643 PLAUP00749 431 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 OPN1SWP03999 348 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 PRG2P13727 222 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 HOXB4P17483 251 aaPredicted RBP13.4□□□□□ -0.26
VARS-223ENST00000474643 FKBP2P26885 142 aaKnown RBP13.4□□□□□ -0.26
VARS-223ENST00000474643 PCGF2P35227 344 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 OR3A2P47893 321 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 OR2B6P58173 313 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 HOXC5Q00444 222 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 BNIP1Q12981 228 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 TAB1Q15750 504 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 VMACQ2NL98 169 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 ERICH5Q6P6B1 374 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 DHRS4L2Q6PKH6 230 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 Q6ZT83 130 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.4□□□□□ -0.26
VARS-223ENST00000474643 NET1Q7Z628 596 aaPredicted RBP13.4□□□□□ -0.26
VARS-223ENST00000474643 PATL1Q86TB9 770 aaKnown RBP13.4□□□□□ -0.26
VARS-223ENST00000474643 KRTAP1-3Q8IUG1 177 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 ARHGAP24Q8N264 748 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 SMYD1Q8NB12 490 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 COX4I2Q96KJ9 171 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 PSD2Q9BQI7 771 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 BCO1Q9HAY6 547 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 FAIMQ9NVQ4 179 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 SELENONQ9NZV5 590 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 OSGIN1Q9UJX0 560 aa13.4□□□□□ -0.26
VARS-223ENST00000474643 NOSIPQ9Y314 301 aaKnown RBP13.4□□□□□ -0.26
VARS-223ENST00000474643 SMAD9O15198 467 aaKnown RBP13.39□□□□□ -0.27
VARS-223ENST00000474643 TPST1O60507 370 aa13.39□□□□□ -0.27
VARS-223ENST00000474643 CNOT4O95628 575 aaKnown RBP13.39□□□□□ -0.27
VARS-223ENST00000474643 T-ENOLP0DO92 83 aa13.39□□□□□ -0.27
VARS-223ENST00000474643 GGT1P19440 569 aa13.39□□□□□ -0.27
VARS-223ENST00000474643 LOXP28300 417 aaPredicted RBP13.39□□□□□ -0.27
VARS-223ENST00000474643 ACAA2P42765 397 aaKnown RBP13.39□□□□□ -0.27
VARS-223ENST00000474643 RGS8P57771 180 aaPredicted RBP13.39□□□□□ -0.27
VARS-223ENST00000474643 PPA1Q15181 289 aa13.39□□□□□ -0.27
VARS-223ENST00000474643 C16orf89Q6UX73 402 aa13.39□□□□□ -0.27
VARS-223ENST00000474643 TMPPEQ6ZT21 453 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms