RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 ZNF155Q12901 538 aaPredicted RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 GK3PQ14409 553 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 NEDD8Q15843 81 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 AVPI1Q5T686 147 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 NSUN5P2Q63ZY6 315 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 ANKRD54Q6NXT1 300 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 KCNIP4Q6PIL6 250 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 KIRREL2Q6UWL6 708 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 ACOT7LQ6ZUV0 252 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 AMIGO2Q86SJ2 522 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 MRPL52Q86TS9 123 aaKnown RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 CIR1Q86X95 450 aaPredicted RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 TRAPPC5Q8IUR0 188 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 TCTE3Q8IZS6 198 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 OR5L2Q8NGL0 311 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 LYPD6BQ8NI32 183 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 ABHD4Q8TB40 342 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 TMEM163Q8TC26 289 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 NUDT8Q8WV74 236 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 TCTEX1D2Q8WW35 142 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 PINX1Q96BK5 328 aaKnown RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 GPR137Q96N19 417 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 HCAR1Q9BXC0 346 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 RNF122Q9H9V4 155 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 GPR132Q9UNW8 380 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 MYH7BA7E2Y1 1941 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 SSU72P8A0A1W2PR75 194 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 TTC24A2A3L6 582 aaPredicted RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 H0YGN5 161 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 CLIC1O00299 241 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 RGS14O43566 566 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 CTSVO60911 334 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 GGCTO75223 188 aaKnown RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 RAD51DO75771 328 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 GLSO94925 669 aaPredicted RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 JUNP05412 331 aaKnown RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 C8AP07357 584 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 BCKDHBP21953 392 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 SLC6A4P31645 630 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 CAMPP49913 170 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 PPOXP50336 477 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 CDH12P55289 794 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 CKS1BP61024 79 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 MC2RQ01718 297 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 EVX2Q03828 476 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 SRSF7Q16629 238 aaKnown RBP eCLIP3.19□□□□□ -1.9
UBR3-208ENST00000474426 MSS51Q4VC12 460 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 PYCR3Q53H96 274 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 CYBRD1Q53TN4 286 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 CARD16Q5EG05 197 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 CBWD5Q5RIA9 395 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 OR2A2Q6IF42 318 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 LRRC8EQ6NSJ5 796 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 TMEM205Q6UW68 189 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 CEACAM20Q6UY09 585 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 MRGPRGQ86SM5 289 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 RBM23Q86U06 439 aaKnown RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 NAA40Q86UY6 237 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 PELI3Q8N2H9 469 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 PACRGLQ8N7B6 248 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 HJURPQ8NCD3 748 aaPredicted RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 OR6N1Q8NGY5 312 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 OR1P1Q8NH06 330 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 TMEM239Q8WW34 195 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 SCARF2Q96GP6 870 aaPredicted RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 TEX37Q96LM6 180 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 ZNF354BQ96LW1 612 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 ARHGDIGQ99819 225 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 ASPNQ9BXN1 380 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 ALG9Q9H6U8 611 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 SLC28A3Q9HAS3 691 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 HCN3Q9P1Z3 774 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 METRNQ9UJH8 293 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 FOXA2Q9Y261 457 aaPredicted RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 FARSAQ9Y285 508 aaKnown RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 PIGLQ9Y2B2 252 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 SLC17A4Q9Y2C5 497 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 KIF1AQ12756 1690 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 ADGRA3Q8IWK6 1321 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 KIAA1551Q9HCM1 1747 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 TBC1D3EA0A087X179 549 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 MYOCOSA0A1B0GUC4 107 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 C20orf202A1L168 122 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 GAGE10A6NGK3 116 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 SH2D7A6NKC9 451 aaPredicted RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 M0R3G1 203 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 WNT10BO00744 389 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 ABHD16AO95870 558 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 PDYNP01213 254 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 IL6RP08887 468 aaPredicted RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 C1GALT1C1LP0DN25 315 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 ZNF182P17025 639 aaPredicted RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 OMGP23515 440 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 APLNRP35414 380 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 DCDP81605 110 aaKnown RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 CAV1Q03135 178 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 TAF13Q15543 124 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 UGT8Q16880 541 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 TPRG1LQ5T0D9 272 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms