RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 CXCR6O00574 342 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 CYTIPO60759 359 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 SYNGR4O95473 234 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 PMS2P2O95744 297 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 TFPIP10646 304 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 UMPSP11172 480 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 UQCRBP14927 111 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 GGT1P19440 569 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 TCN1P20061 433 aaPredicted RBP11.67□□□□□ -0.54
TPM3-216ENST00000473036 CXCR1P25024 350 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 AGTR1P30556 359 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 MSX2P35548 267 aaPredicted RBP11.67□□□□□ -0.54
TPM3-216ENST00000473036 OR1E2P47887 323 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 CLK1P49759 484 aaKnown RBP11.67□□□□□ -0.54
TPM3-216ENST00000473036 P2RY4P51582 365 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 COPZ1P61923 177 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 LTBQ06643 244 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 FLOT2Q14254 428 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 LRRC23Q53EV4 343 aaPredicted RBP11.67□□□□□ -0.54
TPM3-216ENST00000473036 ENTPD8Q5MY95 495 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 C1orf146Q5VVC0 180 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 ABLIM2Q6H8Q1 611 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 OR2A2Q6IF42 318 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 LINC00114Q6XXX2 140 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 FAM214BQ7L5A3 538 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 NUFIP2Q7Z417 695 aaKnown RBP11.67□□□□□ -0.54
TPM3-216ENST00000473036 TSEN54Q7Z6J9 526 aaKnown RBP11.67□□□□□ -0.54
TPM3-216ENST00000473036 VTCN1Q7Z7D3 282 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 LUZP2Q86TE4 346 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 TUSC5Q8IXB3 177 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 AQP12AQ8IXF9 295 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 ZNF610Q8N9Z0 462 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 SLC38A4Q969I6 547 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 ZNF775Q96BV0 537 aaPredicted RBP11.67□□□□□ -0.54
TPM3-216ENST00000473036 KTI12Q96EK9 354 aaPredicted RBP11.67□□□□□ -0.54
TPM3-216ENST00000473036 NSMCE2Q96MF7 247 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 ZNF300Q96RE9 604 aaPredicted RBP11.67□□□□□ -0.54
TPM3-216ENST00000473036 MCHR1Q99705 422 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 ZNF559Q9BR84 538 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 PRRG4Q9BZD6 226 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 TRIM2Q9C040 744 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 PCDHAC1Q9H158 963 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 KLHL28Q9NXS3 571 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 SEC14L4Q9UDX3 406 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 TESQ9UGI8 421 aaKnown RBP11.67□□□□□ -0.54
TPM3-216ENST00000473036 EGFL7Q9UHF1 273 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 SLC7A8Q9UHI5 535 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 BAG5Q9UL15 447 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 POMPQ9Y244 141 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 CPSF4LA6NMK7 179 aaKnown RBP11.66□□□□□ -0.54
TPM3-216ENST00000473036 EEF1E1-BLOC1S5C9J1V9 151 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 EEF1E1O43324 174 aaKnown RBP11.66□□□□□ -0.54
TPM3-216ENST00000473036 FZD7O75084 574 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 CRHP06850 196 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 FCGR2AP12318 317 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 FPR1P21462 350 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 ASCL1P50553 236 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 OR2B6P58173 313 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 PDSS1Q5T2R2 415 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 LCN8Q6JVE9 175 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 C22orf34Q6ZV56 151 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 CARM1Q86X55 608 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 DMRTC2Q8IXT2 367 aaPredicted RBP11.66□□□□□ -0.54
TPM3-216ENST00000473036 TAAR8Q969N4 342 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 FAM162AQ96A26 154 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 GMPPAQ96IJ6 420 aaPredicted RBP11.66□□□□□ -0.54
TPM3-216ENST00000473036 PRSS27Q9BQR3 290 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 POTEKPQ9BYX7 375 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 YY1AP1Q9H869 796 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 C12orf10Q9HB07 376 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 KLHL13Q9P2N7 655 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 SLC13A4Q9UKG4 626 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 TRAPPC4Q9Y296 219 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 SH3GLB1Q9Y371 365 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 SPIN1Q9Y657 262 aaPredicted RBP11.66□□□□□ -0.54
TPM3-216ENST00000473036 SPG11Q96JI7 2443 aa11.66□□□□□ -0.54
TPM3-216ENST00000473036 A0A087WUJ7 227 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 A8MVM7 634 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 H0YHG0 523 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 FMO6PO60774 539 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 PDE5AO76074 875 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 PRKD3O94806 890 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 CCKARP32238 428 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 KRTAP10-9P60411 292 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 SELENOWP63302 87 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 FAM27E3Q08E93 113 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 OR7A5Q15622 319 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 ALG10BQ5I7T1 473 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 C1orf140Q5VVS0 124 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 ULK3Q6PHR2 472 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 CBLL1Q75N03 491 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.65□□□□□ -0.54
TPM3-216ENST00000473036 FAM86B1Q8N7N1 296 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 TMEM99Q8N816 258 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 STK35Q8TDR2 534 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 ADAMTS16Q8TE57 1224 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 RNASE6Q93091 150 aaKnown RBP11.65□□□□□ -0.54
TPM3-216ENST00000473036 CCDC124Q96CT7 223 aaKnown RBP11.65□□□□□ -0.54
TPM3-216ENST00000473036 DDIT4LQ96D03 193 aa11.65□□□□□ -0.54
TPM3-216ENST00000473036 BCO1Q9HAY6 547 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms