RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 SLC35A1P78382 337 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 PDCD4Q53EL6 469 aaKnown RBP7.06□□□□□ -1.28
USP48-207ENST00000471752 PAGE3Q5JUK9 113 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 PHYHD1Q5SRE7 291 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 BEND6Q5SZJ8 279 aaPredicted RBP7.06□□□□□ -1.28
USP48-207ENST00000471752 OTUD3Q5T2D3 398 aaPredicted RBP7.06□□□□□ -1.28
USP48-207ENST00000471752 SLC22A25Q6T423 547 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 ZCCHC24Q8N2G6 241 aaKnown RBP7.06□□□□□ -1.28
USP48-207ENST00000471752 ZNF525Q8N782 197 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 OR10H5Q8NGA6 315 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 OR9K2Q8NGE7 335 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 TAAR8Q969N4 342 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 C3orf49Q96BT1 292 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 MUCL1Q96DR8 90 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 KTI12Q96EK9 354 aaPredicted RBP7.06□□□□□ -1.28
USP48-207ENST00000471752 PTDSS2Q9BVG9 487 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 NELFAQ9H3P2 528 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 MANSC1Q9H8J5 431 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 TMBIM4Q9HC24 238 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 SLC17A5Q9NRA2 495 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 YAE1D1Q9NRH1 226 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 ASB6Q9NWX5 421 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 ADPRHL2Q9NX46 363 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 MALT1Q9UDY8 824 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 ZNF443Q9Y2A4 671 aaPredicted RBP7.06□□□□□ -1.28
USP48-207ENST00000471752 IGKV1D-42A0A075B6H8 117 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 IGHV1-18A0A0C4DH31 117 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 AQP7P3A6NL99 342 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 TMEM229AB2RXF0 380 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 FTCDNL1E5RQL4 147 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 LRRN3E7EW58 273 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 UBDO15205 165 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 ZNF208O43345 1280 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 AGR2O95994 175 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 HPRP00739 348 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 DBIP07108 87 aaKnown RBP7.05□□□□□ -1.28
USP48-207ENST00000471752 IGFBP1P08833 259 aaPredicted RBP7.05□□□□□ -1.28
USP48-207ENST00000471752 HLA-DOBP13765 273 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 CXCR1P25024 350 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 CALCRP30988 508 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 MAGEA8P43361 318 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 CLK1P49759 484 aaKnown RBP7.05□□□□□ -1.28
USP48-207ENST00000471752 IDH3AP50213 366 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 FABP6P51161 128 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 POLR2JP52435 117 aaKnown RBP7.05□□□□□ -1.28
USP48-207ENST00000471752 DSTNP60981 165 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 SELPLGQ14242 412 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 RGNQ15493 299 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 ADRM1Q16186 407 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 MSMPQ1L6U9 139 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 ATG16L1Q676U5 607 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 EPGNQ6UW88 154 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 NHLRC1Q6VVB1 395 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 CREB3L2Q70SY1 520 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 AAED1Q7RTV5 226 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 GPAT4Q86UL3 456 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 TSPYL5Q86VY4 417 aaPredicted RBP7.05□□□□□ -1.28
USP48-207ENST00000471752 ANKS4BQ8N8V4 417 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 PIGXQ8TBF5 258 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 SLC25A43Q8WUT9 341 aaPredicted RBP7.05□□□□□ -1.28
USP48-207ENST00000471752 BCL2L2Q92843 193 aaPredicted RBP7.05□□□□□ -1.28
USP48-207ENST00000471752 SLC25A36Q96CQ1 311 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 THOC1Q96FV9 657 aaKnown RBP7.05□□□□□ -1.28
USP48-207ENST00000471752 RADILQ96JH8 1075 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 DHRS9Q9BPW9 319 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 AMBRA1Q9C0C7 1298 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 FANCFQ9NPI8 374 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 SDR39U1Q9NRG7 319 aaPredicted RBP7.05□□□□□ -1.28
USP48-207ENST00000471752 TAS2R16Q9NYV7 291 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 EMC3Q9P0I2 261 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 B3GAT1Q9P2W7 334 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 MOKQ9UQ07 419 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 ATP23Q9Y6H3 246 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 USH1CQ9Y6N9 552 aa7.05□□□□□ -1.28
USP48-207ENST00000471752 FAAHO00519 579 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 GPR171O14626 319 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 SEC14L2O76054 403 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 IL6P05231 212 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 RPS5P46782 204 aaKnown RBP7.04□□□□□ -1.28
USP48-207ENST00000471752 AQP5P55064 265 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 HPCAP84074 193 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 ARF1P84077 181 aaKnown RBP7.04□□□□□ -1.28
USP48-207ENST00000471752 HGFACQ04756 655 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 SWI5Q1ZZU3 235 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 DPY19L1Q2PZI1 675 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 TTMPQ5BVD1 217 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 ZNF311Q5JNZ3 666 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 C6orf10Q5SRN2 563 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 SWT1Q5T5J6 900 aaKnown RBP7.04□□□□□ -1.28
USP48-207ENST00000471752 C1orf140Q5VVS0 124 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 PAQR6Q6TCH4 344 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 IL17RELQ6ZVW7 336 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 P2RY8Q86VZ1 359 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 CMIPQ8IY22 773 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 LRRC34Q8IZ02 419 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 MUC15Q8N387 334 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 NFKBIDQ8NI38 313 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 DDIT4LQ96D03 193 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 FBXO17Q96EF6 278 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 TRMT61AQ96FX7 289 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms