RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 KIF18BQ86Y91 864 aa10.1□□□□□ -0.79
SREBF1-209ENST00000470247 GNPDA2Q8TDQ7 276 aa10.1□□□□□ -0.79
SREBF1-209ENST00000470247 SMPDL3BQ92485 455 aa10.1□□□□□ -0.79
SREBF1-209ENST00000470247 BBC3Q96PG8 261 aaPredicted RBP10.1□□□□□ -0.79
SREBF1-209ENST00000470247 OR5B2Q96R09 309 aa10.1□□□□□ -0.79
SREBF1-209ENST00000470247 C9orf16Q9BUW7 83 aa10.1□□□□□ -0.79
SREBF1-209ENST00000470247 SRXN1Q9BYN0 137 aa10.1□□□□□ -0.79
SREBF1-209ENST00000470247 KLHL4Q9C0H6 718 aa10.1□□□□□ -0.79
SREBF1-209ENST00000470247 ENKD1Q9H0I2 346 aa10.1□□□□□ -0.79
SREBF1-209ENST00000470247 USE1Q9NZ43 259 aa10.1□□□□□ -0.79
SREBF1-209ENST00000470247 REV1Q9UBZ9 1251 aa10.1□□□□□ -0.79
SREBF1-209ENST00000470247 SEC14L4Q9UDX3 406 aa10.1□□□□□ -0.79
SREBF1-209ENST00000470247 SPIN1Q9Y657 262 aaPredicted RBP10.1□□□□□ -0.79
SREBF1-209ENST00000470247 GTF3C1Q12789 2109 aa10.1□□□□□ -0.79
SREBF1-209ENST00000470247 GJE1A6NN92 205 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 E9PQ18 207 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 OR2T1O43869 369 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 AHSA1O95433 338 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 PMS2P2O95744 297 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 IGFBP1P08833 259 aaPredicted RBP10.09□□□□□ -0.79
SREBF1-209ENST00000470247 GRPRP30550 384 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 IDUAP35475 653 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 IFNGR2P38484 337 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 PTDSS1P48651 473 aaKnown RBP10.09□□□□□ -0.79
SREBF1-209ENST00000470247 DIO1P49895 249 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 AGFG1P52594 562 aaKnown RBP10.09□□□□□ -0.79
SREBF1-209ENST00000470247 DAG1Q14118 895 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 OR7A5Q15622 319 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 C3AR1Q16581 482 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 ZNF239Q16600 458 aaKnown RBP10.09□□□□□ -0.79
SREBF1-209ENST00000470247 EMC4Q5J8M3 183 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 KLHL17Q6TDP4 642 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 NHLRC1Q6VVB1 395 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 LSM14AQ8ND56 463 aaKnown RBP10.09□□□□□ -0.79
SREBF1-209ENST00000470247 OR10D3Q8NH80 312 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 OR2V1Q8NHB1 315 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 OSTF1Q92882 214 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 GTPBP3Q969Y2 492 aaKnown RBP10.09□□□□□ -0.79
SREBF1-209ENST00000470247 EME1Q96AY2 570 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 ZNF845Q96IR2 970 aaPredicted RBP10.09□□□□□ -0.79
SREBF1-209ENST00000470247 TNFRSF13CQ96RJ3 184 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 RBM4BQ9BQ04 359 aaKnown RBP10.09□□□□□ -0.79
SREBF1-209ENST00000470247 RBM4Q9BWF3 364 aaKnown RBP10.09□□□□□ -0.79
SREBF1-209ENST00000470247 PRDM14Q9GZV8 571 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 EXO5Q9H790 373 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 FKRPQ9H9S5 495 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 SIGLEC7Q9Y286 467 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 TMEM5Q9Y2B1 443 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 ITPR1Q14643 2758 aa10.09□□□□□ -0.79
SREBF1-209ENST00000470247 SHANK1Q9Y566 2161 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 COL6A6A6NMZ7 2263 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 OR14I1A6ND48 311 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 TTLL8A6PVC2 850 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 EFCAB9A8MZ26 197 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 NPIPA2E9PIF3 369 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 NPIPA3F8WFD2 350 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 MS4A18H0YCH9 400 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 M0R082 166 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 SULT2B1O00204 365 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 EIF1AYO14602 144 aaKnown RBP10.08□□□□□ -0.8
SREBF1-209ENST00000470247 SEC14L5O43304 696 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 CXCL13O43927 109 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 RAMP1O60894 148 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 MT-ATP6P00846 226 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 EPHA2P29317 976 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 POLR2IP36954 125 aaKnown RBP10.08□□□□□ -0.8
SREBF1-209ENST00000470247 ALDH3A2P51648 485 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 MLLT10P55197 1068 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 CARD18P57730 90 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 OR2B6P58173 313 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 RAC3P60763 192 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 RPS4XP62701 263 aaKnown RBP10.08□□□□□ -0.8
SREBF1-209ENST00000470247 SRYQ05066 204 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 COX10Q12887 443 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 NFATC3Q12968 1075 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 MS4A18Q3C1V0 323 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 GXYLT1Q4G148 440 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 HBMQ6B0K9 141 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 ARHGAP11AQ6P4F7 1023 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 ADGRE4PQ86SQ3 457 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 UBQLNLQ8IYU4 475 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 GHDCQ8N2G8 530 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 GALNT4Q8N4A0 578 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 TMEM99Q8N816 258 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 ATG16L2Q8NAA4 619 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 LRRC75AQ8NAA5 344 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 OR13C2Q8NGS9 318 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 ZNF417Q8TAU3 575 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 SLC25A36Q96CQ1 311 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 ZNF587Q96SQ5 575 aaPredicted RBP10.08□□□□□ -0.8
SREBF1-209ENST00000470247 MCCC2Q9HCC0 563 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 NANSQ9NR45 359 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 MRPL39Q9NYK5 338 aaKnown RBP10.08□□□□□ -0.8
SREBF1-209ENST00000470247 TAS2R5Q9NYW4 299 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 IL20Q9NYY1 176 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 ZNF229Q9UJW7 825 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 POLEQ07864 2286 aa10.08□□□□□ -0.8
SREBF1-209ENST00000470247 SPENQ96T58 3664 aaKnown RBP10.08□□□□□ -0.8
SREBF1-209ENST00000470247 ZGRF1Q86YA3 2104 aa10.07□□□□□ -0.8
SREBF1-209ENST00000470247 TRAV27A0A087WT01 109 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms