RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 OR5AC1P0C628 307 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 IQCF3P0C7M6 154 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 OR8U8P0C7N1 319 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 OR8G3PP0DMU2 310 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 NDUFB7P17568 137 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 HLA-GP17693 338 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 IDSP22304 550 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 MST1P26927 711 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 NDUFS1P28331 727 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 PTPN6P29350 595 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 CSF2RBP32927 897 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 RPL4P36578 427 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 FEN1P39748 380 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 MTNR1AP48039 350 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 TTPAP49638 278 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 PPT1P50897 306 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 IDH3GP51553 393 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 STC1P52823 247 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 CRISP3P54108 245 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 DVL1P1P54792 670 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 CDKN2DP55273 166 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 RGS8P57771 180 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 OR10A3P58181 314 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 TAS2R19P59542 299 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 RPS25P62851 125 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 RPL38P63173 70 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 YBX1P67809 324 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 HSD11B2P80365 405 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 FABP5Q01469 135 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SEMG2Q02383 582 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 TLE4Q04727 773 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 PPP1R8Q12972 351 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 EIF4EBP2Q13542 120 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 GANABQ14697 944 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 NR0B2Q15466 257 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 OR4D1Q15615 310 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 DEFB115Q30KQ5 88 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 NDUFAF6Q330K2 333 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 RFTN2Q52LD8 501 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 XKR6Q5GH73 641 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 DCAF10Q5QP82 559 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 DCST1Q5T197 706 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 C9orf64Q5T6V5 341 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 NKAIN2Q5VXU1 208 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SFXN4Q6P4A7 337 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF613Q6PF04 617 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 POMZP3Q6PJE2 187 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 ENPP7Q6UWV6 458 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 TMEM207Q6UWW9 146 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 RBMS3Q6XE24 437 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 CERS6Q6ZMG9 384 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SLC35D2Q76EJ3 337 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SSX6Q7RTT6 188 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 OVCH1Q7RTY7 1134 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 ANKRD33Q7Z3H0 272 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 OR2W3Q7Z3T1 314 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 C6orf120Q7Z4R8 191 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 PXKQ7Z7A4 578 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 MRGPREQ86SM8 312 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 RANBP3LQ86VV4 465 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 NRROSQ86YC3 692 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 PTOV1Q86YD1 416 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 TGIF2LXQ8IUE1 241 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 GPR135Q8IZ08 494 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 ARL14Q8N4G2 192 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 ACBD7Q8N6N7 88 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 LRRC52Q8N7C0 313 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 ACBD4Q8NC06 268 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SLC30A7Q8NEW0 376 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SEMA6DQ8NFY4 1073 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 OR2AK2Q8NG84 335 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 OR4F15Q8NGB8 312 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 OR11G2Q8NGC1 345 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 OR10J5Q8NHC4 309 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 UBA3Q8TBC4 463 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 TRMT10AQ8TBZ6 339 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 GRAPLQ8TC17 118 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 BRIX1Q8TDN6 353 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 PAQR8Q8TEZ7 354 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 EEF1AKMT1Q8WVE0 214 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 PCNPQ8WW12 178 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 DNAJB3Q8WWF6 145 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 LINC01599Q8WXQ3 324 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 VOPP1Q96AW1 172 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 OTUB2Q96DC9 234 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 FAM122AQ96E09 287 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 C14orf79Q96F83 325 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SENP5Q96HI0 755 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 HPDLQ96IR7 371 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 TPD52L3Q96J77 140 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 HHIPL1Q96JK4 782 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF385AQ96PM9 386 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SLC2A13Q96QE2 648 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 ORAI2Q96SN7 254 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 NRIP2Q9BQI9 281 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SLC25A21Q9BQT8 299 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 MRPL45Q9BRJ2 306 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 PCGF1Q9BSM1 259 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SOX7Q9BT81 388 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 ALG8Q9BVK2 526 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms