RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 FKRPQ9H9S5 495 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 C20orf141Q9NUB4 165 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 TINAGQ9UJW2 476 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 OSGIN2Q9Y236 505 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 TRGV8A0A0C4DH27 118 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 SLC22A20A6NK97 555 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 H0YHG0 523 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 PIP5K1CO60331 668 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 OR10H3O60404 316 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 CCNB2O95067 398 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 CH25HO95992 272 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 BGLAPP02818 100 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 IFI30P13284 250 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 CA7P43166 264 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 AGFG1P52594 562 aaKnown RBP13.62□□□□□ -0.23
SNIP1-202ENST00000468040 SEC23BQ15437 767 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 IGFBP7Q16270 282 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 PPP4R4Q6NUP7 873 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 TBPL2Q6SJ96 375 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 PAQR6Q6TCH4 344 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 B3GNT6Q6ZMB0 384 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 MAMDC2Q7Z304 686 aaPredicted RBP13.62□□□□□ -0.23
SNIP1-202ENST00000468040 P4HA3Q7Z4N8 544 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 SCAIQ8N9R8 606 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 SLC25A36Q96CQ1 311 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 CENPNQ96H22 339 aaPredicted RBP13.62□□□□□ -0.23
SNIP1-202ENST00000468040 ASPNQ9BXN1 380 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 PRRG4Q9BZD6 226 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 NANSQ9NR45 359 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 VNN3Q9NY84 501 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 C6orf203Q9P0P8 240 aaPredicted RBP13.62□□□□□ -0.23
SNIP1-202ENST00000468040 CLCF1Q9UBD9 225 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 ZNF229Q9UJW7 825 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 B3GALT5Q9Y2C3 310 aa13.62□□□□□ -0.23
SNIP1-202ENST00000468040 KALRNO60229 2985 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 ARRDC5A6NEK1 342 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 E9PLN8 166 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 OR7A10O76100 309 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 HIST1H2ABP04908 130 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 GNLYP22749 145 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 ELF3P78545 371 aaPredicted RBP13.61□□□□□ -0.23
SNIP1-202ENST00000468040 LSM11P83369 360 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNIP1-202ENST00000468040 H3F3AP84243 136 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 MICAQ29983 383 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 GTF2IRD2BQ6EKJ0 949 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 RPTNQ6XPR3 784 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 TMPRSS11FQ6ZWK6 438 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 HIST3H2AQ7L7L0 130 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 GTF2IRD2Q86UP8 949 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 LSRQ86X29 649 aaPredicted RBP13.61□□□□□ -0.23
SNIP1-202ENST00000468040 SLC43A2Q8N370 569 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 FNDC9Q8TBE3 224 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 LIPHQ8WWY8 451 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 LRTOMTQ8WZ04 291 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 HIST1H2ACQ93077 130 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 WNT2BQ93097 391 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 NRBF2Q96F24 287 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 MOGAT1Q96PD6 335 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 TM9SF2Q99805 663 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 VKORC1Q9BQB6 163 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 MRPL39Q9NYK5 338 aaKnown RBP13.61□□□□□ -0.23
SNIP1-202ENST00000468040 SH3BGRL2Q9UJC5 107 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 FAM215AQ9Y5M1 114 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 GTF3C1Q12789 2109 aa13.61□□□□□ -0.23
SNIP1-202ENST00000468040 SPENQ96T58 3664 aaKnown RBP13.61□□□□□ -0.23
SNIP1-202ENST00000468040 ZGRF1Q86YA3 2104 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 A0A1B0GUH1 482 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 MBD3L4A6NDZ8 208 aaPredicted RBP13.6□□□□□ -0.23
SNIP1-202ENST00000468040 MBD3L3A6NE82 208 aaPredicted RBP13.6□□□□□ -0.23
SNIP1-202ENST00000468040 MBD3L5A6NJ08 208 aaPredicted RBP13.6□□□□□ -0.23
SNIP1-202ENST00000468040 AQP7P3A6NL99 342 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 EFCAB9A8MZ26 197 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 SMAD9O15198 467 aaKnown RBP13.6□□□□□ -0.23
SNIP1-202ENST00000468040 AKR7A3O95154 331 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 ASAH2BP0C7U1 165 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 SAGP10523 405 aaPredicted RBP13.6□□□□□ -0.23
SNIP1-202ENST00000468040 FUT1P19526 365 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 CBLP22681 906 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 GRPRP30550 384 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 OMPP47874 163 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 IST1P53990 364 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 LTBQ06643 244 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 PPP1R8Q12972 351 aaKnown RBP13.6□□□□□ -0.23
SNIP1-202ENST00000468040 RNPS1Q15287 305 aaKnown RBP13.6□□□□□ -0.23
SNIP1-202ENST00000468040 OTUD3Q5T2D3 398 aaPredicted RBP13.6□□□□□ -0.23
SNIP1-202ENST00000468040 RTL6Q6ICC9 239 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 TMEM211Q6ICI0 200 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 OR2A2Q6IF42 318 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 SHQ1Q6PI26 577 aaKnown RBP13.6□□□□□ -0.23
SNIP1-202ENST00000468040 C3P1Q6ZMU1 363 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 H1FNTQ75WM6 255 aaPredicted RBP13.6□□□□□ -0.23
SNIP1-202ENST00000468040 FCRLAQ7L513 359 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 SLC46A3Q7Z3Q1 461 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 AMIGO2Q86SJ2 522 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 ADPRHL1Q8NDY3 354 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 OR10G2Q8NGC3 310 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 OR5J2Q8NH18 312 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 MBD3L2Q8NHZ7 208 aaPredicted RBP13.6□□□□□ -0.23
SNIP1-202ENST00000468040 RNF128Q8TEB7 428 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 GIPC3Q8TF64 312 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms