RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 LIPT2A6NK58 231 aa18.43■□□□□ 0.54
COL9A3-207ENST00000467819 RFXANKO14593 260 aa18.43■□□□□ 0.54
COL9A3-207ENST00000467819 KRT75O95678 551 aa18.43■□□□□ 0.54
COL9A3-207ENST00000467819 KITP10721 976 aa18.43■□□□□ 0.54
COL9A3-207ENST00000467819 LRRC74AQ0VAA2 488 aa18.43■□□□□ 0.54
COL9A3-207ENST00000467819 BNIP2Q12982 314 aa18.43■□□□□ 0.54
COL9A3-207ENST00000467819 MAPK11Q15759 364 aa18.43■□□□□ 0.54
COL9A3-207ENST00000467819 LIN52Q52LA3 116 aa18.43■□□□□ 0.54
COL9A3-207ENST00000467819 ZIC4Q8N9L1 334 aa18.43■□□□□ 0.54
COL9A3-207ENST00000467819 OR52P1PQ8NH57 321 aa18.43■□□□□ 0.54
COL9A3-207ENST00000467819 FAM168AQ92567 244 aa18.43■□□□□ 0.54
COL9A3-207ENST00000467819 ADPRHL2Q9NX46 363 aa18.43■□□□□ 0.54
COL9A3-207ENST00000467819 CDHR4A6H8M9 788 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 AQP7P3A6NL99 342 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 ELOA3DA6NLF2 546 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-207ENST00000467819 KLF11O14901 512 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 LY6HO94772 140 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 WNT11O96014 354 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 BCHEP06276 602 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 ETFAP13804 333 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 SLC25A16P16260 332 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 APOBEC3AP31941 199 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-207ENST00000467819 PRPS1P60891 318 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 CHRNB3Q05901 458 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 LOXL1Q08397 574 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-207ENST00000467819 GSTA3Q16772 222 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 ELOA3BQ3SY89 546 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 HIKESHIQ53FT3 197 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 TNFAIP8L3Q5GJ75 292 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 NXNQ6DKJ4 435 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 POMGNT2Q8NAT1 580 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 ELOA3Q8NG57 546 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 AURKBQ96GD4 344 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-207ENST00000467819 PARD6BQ9BYG5 372 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 MOKQ9UQ07 419 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 PMF1-BGLAPU3KQ54 211 aa18.42■□□□□ 0.54
COL9A3-207ENST00000467819 HDAC3O15379 428 aa18.41■□□□□ 0.54
COL9A3-207ENST00000467819 KRT33AO76009 404 aa18.41■□□□□ 0.54
COL9A3-207ENST00000467819 BMP4P12644 408 aa18.41■□□□□ 0.54
COL9A3-207ENST00000467819 ACAA2P42765 397 aaKnown RBP18.41■□□□□ 0.54
COL9A3-207ENST00000467819 CRATP43155 626 aa18.41■□□□□ 0.54
COL9A3-207ENST00000467819 EFNA4P52798 201 aa18.41■□□□□ 0.54
COL9A3-207ENST00000467819 COPZ1P61923 177 aa18.41■□□□□ 0.54
COL9A3-207ENST00000467819 RPS26P11Q5JNZ5 115 aaPredicted RBP18.41■□□□□ 0.54
COL9A3-207ENST00000467819 TMEM225Q6GV28 225 aa18.41■□□□□ 0.54
COL9A3-207ENST00000467819 WBP2NLQ6ICG8 309 aa18.41■□□□□ 0.54
COL9A3-207ENST00000467819 GLB1L3Q8NCI6 653 aaPredicted RBP18.41■□□□□ 0.54
COL9A3-207ENST00000467819 C10orf105Q8TEF2 133 aa18.41■□□□□ 0.54
COL9A3-207ENST00000467819 NANOS1Q8WY41 292 aaKnown RBP18.41■□□□□ 0.54
COL9A3-207ENST00000467819 FBXO17Q96EF6 278 aa18.41■□□□□ 0.54
COL9A3-207ENST00000467819 SF3B5Q9BWJ5 86 aaKnown RBP18.41■□□□□ 0.54
COL9A3-207ENST00000467819 TAPBPLQ9BX59 468 aa18.41■□□□□ 0.54
COL9A3-207ENST00000467819 ZNF443Q9Y2A4 671 aaPredicted RBP18.41■□□□□ 0.54
COL9A3-207ENST00000467819 DSPPQ9NZW4 1301 aa18.41■□□□□ 0.54
COL9A3-207ENST00000467819 TRPC5OSA6NMA1 111 aa18.4■□□□□ 0.54
COL9A3-207ENST00000467819 ANP32DO95626 131 aa18.4■□□□□ 0.54
COL9A3-207ENST00000467819 PRG2P13727 222 aa18.4■□□□□ 0.54
COL9A3-207ENST00000467819 NCF2P19878 526 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-207ENST00000467819 MVDP53602 400 aa18.4■□□□□ 0.54
COL9A3-207ENST00000467819 CRISP3P54108 245 aa18.4■□□□□ 0.54
COL9A3-207ENST00000467819 DSTNP60981 165 aa18.4■□□□□ 0.54
COL9A3-207ENST00000467819 VLDLRP98155 873 aa18.4■□□□□ 0.54
COL9A3-207ENST00000467819 LGALS3BPQ08380 585 aa18.4■□□□□ 0.54
COL9A3-207ENST00000467819 ABHD12BQ7Z5M8 362 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-207ENST00000467819 MGARPQ8TDB4 240 aa18.4■□□□□ 0.54
COL9A3-207ENST00000467819 KCNK17Q96T54 332 aa18.4■□□□□ 0.54
COL9A3-207ENST00000467819 CALML5Q9NZT1 146 aa18.4■□□□□ 0.54
COL9A3-207ENST00000467819 A8MVM7 634 aa18.39■□□□□ 0.53
COL9A3-207ENST00000467819 FRS3O43559 492 aa18.39■□□□□ 0.53
COL9A3-207ENST00000467819 SLC22A3O75751 556 aa18.39■□□□□ 0.53
COL9A3-207ENST00000467819 LGI1O95970 557 aa18.39■□□□□ 0.53
COL9A3-207ENST00000467819 IL6P05231 212 aa18.39■□□□□ 0.53
COL9A3-207ENST00000467819 ZNF16P17020 682 aaPredicted RBP18.39■□□□□ 0.53
COL9A3-207ENST00000467819 SELENOPP49908 381 aa18.39■□□□□ 0.53
COL9A3-207ENST00000467819 WDR4P57081 412 aaKnown RBP18.39■□□□□ 0.53
COL9A3-207ENST00000467819 GTDC1Q4AE62 458 aa18.39■□□□□ 0.53
COL9A3-207ENST00000467819 PDCD4Q53EL6 469 aaKnown RBP18.39■□□□□ 0.53
COL9A3-207ENST00000467819 RNF220Q5VTB9 566 aa18.39■□□□□ 0.53
COL9A3-207ENST00000467819 PHC2Q8IXK0 858 aa18.39■□□□□ 0.53
COL9A3-207ENST00000467819 CLIP4Q8N3C7 705 aa18.39■□□□□ 0.53
COL9A3-207ENST00000467819 SLC38A5Q8WUX1 472 aa18.39■□□□□ 0.53
COL9A3-207ENST00000467819 TMEM19Q96HH6 336 aa18.39■□□□□ 0.53
COL9A3-207ENST00000467819 ALKBH3Q96Q83 286 aaPredicted RBP18.39■□□□□ 0.53
COL9A3-207ENST00000467819 THAP1Q9NVV9 213 aa18.39■□□□□ 0.53
COL9A3-207ENST00000467819 CDC42EP3Q9UKI2 254 aa18.39■□□□□ 0.53
COL9A3-207ENST00000467819 IGHV1-18A0A0C4DH31 117 aa18.38■□□□□ 0.53
COL9A3-207ENST00000467819 ZNF587BE7ETH6 402 aa18.38■□□□□ 0.53
COL9A3-207ENST00000467819 SNNO75324 88 aaPredicted RBP18.38■□□□□ 0.53
COL9A3-207ENST00000467819 CSF3P09919 207 aa18.38■□□□□ 0.53
COL9A3-207ENST00000467819 TFPTP0C1Z6 253 aa18.38■□□□□ 0.53
COL9A3-207ENST00000467819 IDO1P14902 403 aa18.38■□□□□ 0.53
COL9A3-207ENST00000467819 P2RY4P51582 365 aa18.38■□□□□ 0.53
COL9A3-207ENST00000467819 LARS2Q15031 903 aaKnown RBP18.38■□□□□ 0.53
COL9A3-207ENST00000467819 TBRG1Q3YBR2 411 aa18.38■□□□□ 0.53
COL9A3-207ENST00000467819 C1QTNF12Q5T7M4 302 aa18.38■□□□□ 0.53
COL9A3-207ENST00000467819 C1orf140Q5VVS0 124 aa18.38■□□□□ 0.53
COL9A3-207ENST00000467819 PRAMEF8Q5VWM4 474 aa18.38■□□□□ 0.53
COL9A3-207ENST00000467819 PRAMEF7Q5VXH5 474 aa18.38■□□□□ 0.53
COL9A3-207ENST00000467819 NIPAL3Q6P499 406 aa18.38■□□□□ 0.53
COL9A3-207ENST00000467819 OR1K1Q8NGR3 316 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms