RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CAPZA2P47755 286 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 H3F3AP84243 136 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 DR1Q01658 176 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 SKP2Q13309 424 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 ATP6AP1LQ52LC2 224 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 PDZK1Q5T2W1 519 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 C11orf87Q6NUJ2 197 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 FIP1L1Q6UN15 594 aaKnown RBP8.72□□□□□ -1.01
HDAC3-203ENST00000467533 C3orf62Q6ZUJ4 267 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 LRP11Q86VZ4 500 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 JAZF1Q86VZ6 243 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 IL17RDQ8NFM7 739 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 OR9K2Q8NGE7 335 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 ACTRT1Q8TDG2 376 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 TIMD4Q96H15 378 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 STACQ99469 402 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 CCDC106Q9BWC9 280 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 GATA5Q9BWX5 397 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-203ENST00000467533 LAT2Q9GZY6 243 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 PIGUQ9H490 435 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 ZCCHC3Q9NUD5 404 aaKnown RBP8.72□□□□□ -1.01
HDAC3-203ENST00000467533 UBAP1Q9NZ09 502 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 GRHL1Q9NZI5 618 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 C1RLQ9NZP8 487 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 PURGQ9UJV8 347 aaKnown RBP8.72□□□□□ -1.01
HDAC3-203ENST00000467533 RNF114Q9Y508 228 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 IGHV3OR16-10A0A075B7F0 116 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 IGHV1-69-2A0A0G2JMI3 117 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 NPIPB9F8W1W9 429 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 TP73O15350 636 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 TPD52L2O43399 206 aaKnown RBP8.71□□□□□ -1.02
HDAC3-203ENST00000467533 FOXH1O75593 365 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 NDUFA7O95182 113 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 CSTAP01040 98 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 HMGN2P05204 90 aaKnown RBP8.71□□□□□ -1.02
HDAC3-203ENST00000467533 HOXB1P14653 301 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-203ENST00000467533 CLK1P49759 484 aaKnown RBP8.71□□□□□ -1.02
HDAC3-203ENST00000467533 SELENOPP49908 381 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 SERPINB8P50452 374 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 SH3BGRP55822 239 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-203ENST00000467533 RPS23P62266 143 aaKnown RBP8.71□□□□□ -1.02
HDAC3-203ENST00000467533 CCL8P80075 99 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 RELBQ01201 579 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 TEKQ02763 1124 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 CLCQ05315 142 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 PDCD1Q15116 288 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 IMPG1Q17R60 797 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 NKPD1Q17RQ9 610 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 EXOSC6Q5RKV6 272 aaKnown RBP8.71□□□□□ -1.02
HDAC3-203ENST00000467533 SAMD5Q5TGI4 173 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 GKAP1Q5VSY0 366 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-203ENST00000467533 GPRIN3Q6ZVF9 776 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 LINGO2Q7L985 606 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 GPAT4Q86UL3 456 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 MDP1Q86V88 176 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 LSRQ86X29 649 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-203ENST00000467533 KLHL7Q8IXQ5 586 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 PARP8Q8N3A8 854 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 GTF3AQ92664 365 aaKnown RBP8.71□□□□□ -1.02
HDAC3-203ENST00000467533 RAB1CQ92928 201 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 TRIM44Q96DX7 344 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-203ENST00000467533 MRRFQ96E11 262 aaKnown RBP8.71□□□□□ -1.02
HDAC3-203ENST00000467533 SLC30A2Q9BRI3 323 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 SIRT5Q9NXA8 310 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 SEC14L4Q9UDX3 406 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 DUSP13Q9UII6 198 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 LEF1Q9UJU2 399 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-203ENST00000467533 TRAPPC4Q9Y296 219 aa8.71□□□□□ -1.02
HDAC3-203ENST00000467533 TET2Q6N021 2002 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-203ENST00000467533 PPIAL4EA0A075B759 164 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 PPIAL4CA0A0B4J2A2 164 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 ZNF503-AS2A6NEH8 195 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 TRIM49D1C9J1S8 452 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 PPIAL4DF5H284 164 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 DNAJA2O60884 412 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 GSTA2P09210 222 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 CSF1P09603 554 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 PPIAL4FP0DN26 164 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 IMPDH2P12268 514 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 FKBP2P26885 142 aaKnown RBP8.7□□□□□ -1.02
HDAC3-203ENST00000467533 STX2P32856 288 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 GLRXP35754 106 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 HSD17B3P37058 310 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 GALK2Q01415 458 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 ROR2Q01974 943 aaKnown RBP8.7□□□□□ -1.02
HDAC3-203ENST00000467533 ZNF154Q13106 437 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 NAB1Q13506 487 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 UAP1Q16222 522 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-203ENST00000467533 TRMT5Q32P41 509 aaKnown RBP8.7□□□□□ -1.02
HDAC3-203ENST00000467533 MMEL1Q495T6 779 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 ZNF385BQ569K4 471 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 RUSC1-AS1Q66K80 236 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 NIPAL3Q6P499 406 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 TMEM154Q6P9G4 183 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 PAQR6Q6TCH4 344 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 ZNF662Q6ZS27 426 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 CYS1Q717R9 158 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 GRINAQ7Z429 371 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 ZIC4Q8N9L1 334 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 SPC24Q8NBT2 197 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms